Chamaesiphon minutus: Cha6605_0807
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Entry
Cha6605_0807 CDS
T02414
Name
(GenBank) Carbohydrate-selective porin, OprB family
Organism
cmp
Chamaesiphon minutus
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OprB
DUF7552
Motif
Other DBs
NCBI-ProteinID:
AFY92074
UniProt:
K9UCY3
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Position
887123..888700
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AA seq
525 aa
AA seq
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MSSAFWKSVLISPVVLGISLLLSTGVIAAPKTATGNASDLILNKASGATPVSIAATEPAE
SPDEVVSEIVKPTDSSYQALQGIATKYGCEPNLNNKPVSQIEFARGLNVCLSKVEPMLAQ
QPASVTREDLEVIQRLTQEYRAQLAEIDSRLVNTDKKVAQLQANQFSTTTKLKGEAVFNV
ASVISGGDNSNIIFADRVRLLFQSSFTGKDILWTRLATGNQPSLGGTFRSPSTVGGQVIE
TGGTNSVSVDWLAYQFPVANTNVYVAAFNALQADYAPTYGSNFDDFSGASGAISAFAESS
PIYKIGGGSGVGTNIPIAETGLTSVSLGYFAFGANNPTNTPPVTGGLFGTDNSLFGQLNF
KLSPQLEGGLTYINSSHNGSIFNGTGVVVGTPLANNLALTSPGGRTTADSFGLALAYKAS
DKLAFNGFAMTTNARRGGVTDNIWSYGAGISFPDVDGRGSLAGIFVGAEPYVGGVGSTPF
HFEGFYKYKLSDNLSITPGLIYLTSPDQVTNNSALIGVVRTTFLF
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcagcattttggaaatctgtattaattagccctgtagtgttaggcatctcgttg
ctattatccactggagtaatcgccgcacccaaaacagctactggcaatgctagtgactta
atcttaaataaagccagtggtgctacacctgtttcaattgccgccaccgagccagccgaa
agtcctgatgaggtagttagtgaaatcgtcaaacctactgactcatcctatcaagctctc
caaggtatcgctaccaaatatggttgcgagcctaacctcaacaacaaacccgtatcgcaa
attgaatttgcacgcggtttgaatgtttgtctgagcaaagtcgaacccatgttggctcaa
cagcctgctagtgtcacccgcgaagacctcgaagtcatccagagattgactcaagagtat
cgcgctcaactagctgaaattgacagtcgcctagtcaatacagacaaaaaagtcgctcaa
ctccaagccaaccagttctcgaccactaccaaacttaaaggtgaagcagtctttaacgtc
gctagtgtgattagtggtggcgacaatagtaatattatcttcgccgatcgtgtccggtta
ctattccaaagtagcttcacaggtaaagatatcctctggactcgtcttgcaactggtaac
caaccatccctcggtggtacattcagaagcccaagcactgtcggcggtcaagtcatcgaa
actggtggcaccaatagtgtcagtgttgactggttagcgtatcagttccccgttgctaat
accaatgtctacgtagcagcatttaacgctctgcaagctgactatgctcccacctatgga
tctaactttgatgatttcagtggtgctagcggcgcaatctcggcctttgcagaatctagt
cccatctacaaaattggtggcggtagcggcgttggtacgaatattccgatcgctgaaact
ggtctgacttctgtctccctcggctactttgcatttggtgccaataaccctacaaacacc
cctcctgttacaggcggtttatttggtaccgataattccctcttcggtcaacttaacttc
aaactcagccctcaattagaaggcggtctcacctatatcaatagctcccataatggcagt
atcttcaatggtactggtgtagttgtgggtactcctctagctaataatcttgctctgact
agcccaggcggtcgcaccacggctgattccttcggtttggcattggcctacaaagccagc
gataaactagccttcaatggttttgcgatgaccaccaatgcgcgcaggggcggtgttact
gacaatatctggagctatggtgcaggcatatctttccctgatgttgatggccgaggcagc
ctcgctggtatatttgtaggtgcggaaccttatgttggtggtgttggcagcactccgttc
cactttgaaggtttctacaagtacaaactcagcgataatctctcgattactcctggtttg
atctatctcacttcccccgaccaagttaccaataacagtgcgttaatcggtgtagtgaga
actactttcctcttctaa
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