Chamaesiphon minutus: Cha6605_1520
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Entry
Cha6605_1520 CDS
T02414
Name
(GenBank) DNA topoisomerase I, bacterial
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
cmp
Chamaesiphon minutus
Brite
KEGG Orthology (KO) [BR:
cmp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cmp03032
]
Cha6605_1520
03400 DNA repair and recombination proteins [BR:
cmp03400
]
Cha6605_1520
Enzymes [BR:
cmp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Cha6605_1520
DNA replication proteins [BR:
cmp03032
]
Prokaryotic type
DNA Topoisomerases
Cha6605_1520
DNA repair and recombination proteins [BR:
cmp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Cha6605_1520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Motif
Other DBs
NCBI-ProteinID:
AFY92680
UniProt:
K9UCX5
LinkDB
All DBs
Position
complement(1606973..1609150)
Genome browser
AA seq
725 aa
AA seq
DB search
MRNLLIVESAGKIKKLKSILGSDWDVKASIGHIRQLANDGDGALGFDLGAETIDCRYIPR
DDRAKQTIAGLIAAAKQADRVFIASDPDREGEVIGWHIAQVLKLKQPQRVVYQEITESAV
KKAIASPRSLDMALVEAGRCRDCLDKLVGYKGSPLIWRLNNGAKSVGRVQSATLHLVCQR
EREIQAFKPQDYWSVFVDYAEGFRAFYNGTAQTVSPVADEETSDDAGATEKVAESTRVLS
QAEADRLVAIGKANSHQVSTIEGKLAPKKPPAPFITSSLQQAAGARLKFSPEHTMSVAQK
LYEAGLITYMRTDSVELSQDFCTAAREWLLAHDRDNVPTKVAKQRSSKDAQEAHEAVRPT
DITKASSELKQQLSADEFALYVMIWMRSIASQCKPAQIRKTTIVTQSGEIQWQARGQMLE
FAGYAKYWKDISGDAVLPSVQPKQPLTAANVSHEQKQTQPPPRYSEPKLVQLMERRGIGR
PSTYAPTIATLKQRNYVELVKSKVQPTTVGLQVDDFLIQALPELIQSEFTAGMETQLDAI
SKGQQEWQSYLIEWNRSYFAPALSKATKNLPEQDYGSFQGKELEKSRSKCPTCSKPMSKV
PTKKVKKGYFLKCEDGCKDAEGKGLVMFWSERTSEWQLPQPKTEQSSPPKLTEHPCPVCQ
KPLEEYNYTKDGQAKSMLRCSDAAARTRPKHKDIAYFRGNQGQWWSPKLGNLGADAAKSS
QVKAQ
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaatctgctcatcgttgaatctgctggcaaaattaaaaagctcaaaagcatcctc
ggatcggattgggatgtcaaggcttcaatcgggcatattcgccaactcgccaacgatggg
gacggtgcgttaggcttcgatctgggtgcagagacaatcgattgccgctacatcccccgc
gacgacagagccaaacaaacaatagccggactaattgccgcagcaaagcaagcagatcga
gtcttcatcgcctcagatccagatcgggaaggtgaagtaattggctggcatatcgcccag
gtattgaagctcaaacagccccagcgggtggtctatcaagagattaccgaatccgctgtc
aaaaaagcaattgccagtccgcgatcgctcgatatggctctagtagaggcgggtaggtgt
cgcgattgtctggacaaattggtaggctacaaaggatcgcccctcatctggcgactcaat
aacggtgcaaaaagcgtcgggagggtgcaatctgccaccctgcatctagtctgccaacga
gagcgggaaattcaagccttcaaaccccaagattattggtcggtatttgtagactatgct
gaaggtttccgcgcattctataacggcacggctcaaactgtttcgccagtagcagacgaa
gaaaccagcgacgatgcgggagcgacagaaaaagtcgccgaatcgacgcgcgtattaagt
caagcggaagctgacaggttggtggcaattggtaaagccaactcgcatcaagtctccaca
atcgaaggtaaactcgcgcctaaaaaaccacccgccccatttatcacatcctcgctccaa
caagccgcaggagcgcgcttgaagttcagccctgaacatacgatgtccgtcgcccagaag
ctgtatgaggcggggttaattacttacatgcggactgattctgtcgaactcagtcaggat
ttttgtacagcggcacgggaatggctactcgctcacgatcgagataatgtacctacgaaa
gtcgccaaacagcgcagttctaaagatgctcaggaagcccacgaagcggtcagaccgacg
gatattaccaaagcatcaagcgaactcaaacaacagctttcagcggatgaatttgcgctg
tacgtaatgatttggatgcgatcgatcgcttctcaatgcaaacctgctcagattcgcaaa
accacgatcgtcactcaatctggtgagattcaatggcaagccagagggcagatgctggaa
tttgcgggctatgctaaatattggaaggatattagcggtgatgccgtgctacctagcgta
caacccaaacaaccactcaccgcagctaatgtcagtcacgagcagaaacaaacccaacca
ccaccacgctacagtgagccaaaactcgtccaactgatggaacggcgagggatcggtcgt
ccttcgacttacgcaccgactattgccaccctcaagcaacgtaattatgtcgagctggtg
aagagtaaagtgcaaccgacgactgttggtttgcaagtagatgattttctcatacaagct
ttgccagagttgattcaatcggaatttactgctgggatggaaactcaactcgatgcaatc
tccaagggtcagcaggaatggcaaagttacctgattgagtggaaccgaagttattttgcg
ccagcattaagcaaggctaccaagaatctaccggagcaggactatgggtcgttccaaggt
aaggaactggaaaaatcgcgctcgaaatgtccgacttgcagtaaaccaatgtccaaagta
cctactaagaaggtaaagaaggggtatttcctcaagtgtgaggatggctgcaaagatgct
gagggtaaagggttggtgatgttttggtcggagcgaacgagtgaatggcaactcccacag
ccgaaaaccgagcagtcatctccgccaaagttaaccgaacatccttgtccagtttgccag
aagccgctggaagaatacaattatactaaggatggacaagccaagtcgatgctgcgatgt
tcggatgcagcagctcgaactagaccaaaacacaaagatatcgcctattttcgagggaac
caggggcaatggtggagtccaaaattgggtaatctcggcgcggatgcggctaaatcgagc
caggtaaaagcacaatag
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