Chamaesiphon minutus: Cha6605_1821
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Entry
Cha6605_1821 CDS
T02414
Name
(GenBank) site-specific recombinase XerD
Organism
cmp
Chamaesiphon minutus
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Zn_ribbon_IS1595
Zn_ribbon_InsA
Phage_int_SAM_5
IBR_1
Motif
Other DBs
NCBI-ProteinID:
AFY92942
UniProt:
K9UCW3
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Position
1887938..1889920
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AA seq
660 aa
AA seq
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MIEINWQRDYHGEFTCPRCSYLPLKLKGNYRGSKKLFCSQCRNTIISSVQLSSRSRYLES
RMKDEYIDWERDYHGEFICPECDAPGISARGIRKKSGKRHFGCPTCKKKQEESCEISIIK
IEDPLNPGVNWYTNHRIGGFICPKCQAEDIYLTGIRFGKKRFQCKSCKHRQLDSLILSNV
NVSHYSDNTSSAIKSFDWKDEQWDLRTINPNFDDRDRGIHLANFANIHPVWFKVEVKKYV
KHLCKTGRSLSTIQQDLSTLRRFSRYLVRENISSFDEINRSLILDYLVREQKVNKLKLSG
LRKLFTIGTTKGWFDIDQDIIRDADYPKQYQSNPDPISDQVREQVEQNLHLLPDPIARMW
LIGYFSAMRPSELALLKRDCLVREGQHWKLIWHRKKTDDYHEIPISRTVAKVVQDQQEYI
QNLWGDKWDYLFCHYHNLSKTDVSQPQLEPVTKVLPIHANHPLSVGIRTLITVLDIRDEN
GLLAKFQSKLLRSTRLTELFAQGHDLAVVSAWAGHKQFATTATHYTEVSCNLIEKETGHI
QKALVNSNGHRILYESFPKSFWETPISHKLELTQTHVNTPIYGYCGLPLNQDCHKSRACY
TCECFVATIEKLPQYINTLNELRAKLIKAMSVGQEVLVEQFGRQAEQLDKIIASLQQGAA
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgatagagattaattggcagcgagattatcatggtgagtttacatgtccaagatgctct
tacttgccactaaagttaaaaggaaattacagaggcagtaaaaagcttttttgttcgcaa
tgtcgaaatacaatcattagttcagtccaattaagtagccgttcgagatacttggaatct
cgaatgaaggatgaatatatcgattgggagcgggattaccacggtgaatttatttgtcca
gaatgtgatgctccaggtatttcagctagaggaatacgtaaaaaatctggtaaaaggcac
tttggttgtcctacttgtaaaaagaaacaagaagagtcatgtgaaatcagcataattaaa
atagaagatcctctcaatcccggagttaattggtacaccaatcatcgaattggaggcttc
atttgtcctaaatgccaagctgaagatatttatctaactggcatcaggtttggtaaaaag
agatttcaatgtaaaagctgcaagcatcgtcaacttgactcactgattttgagtaatgtg
aatgttagtcattatagcgacaacactagttcagcaataaaatcatttgactggaaagat
gagcaatgggatttgagaacgattaaccctaattttgatgaccgagatcgaggaatacat
ctagccaactttgctaatattcatccagtttggtttaaagttgaagttaaaaaatatgtt
aagcatctttgtaagactggtagatctctaagcacaatccagcaagatctgtctacactc
agacggttctctcgctatttagttagagaaaacatatctagttttgatgaaatcaatcgt
agccttatccttgattatctagttcgagaacagaaggttaataaacttaaactaagtgga
ttgcgaaaactattcaccatcggaacgactaaaggttggtttgatatcgaccaagacatc
atccgcgatgccgactatccaaaacagtatcaatccaatcccgacccgatatcagaccag
gtaagggagcaagtagaacagaatttacatttattaccagatccgattgctcgaatgtgg
ttgataggttacttttctgctatgcgtccttcagaactagccttgctcaaacgagattgt
ctagttcgagaaggacaacattggaaattaatctggcatcgaaaaaagactgatgactat
catgaaataccgattagtagaactgttgctaaagtagtccaagatcaacaggagtatatt
caaaatctttggggcgataaatgggattacctattttgtcactatcacaatttatcaaag
actgacgtatcccaacctcaactagaaccagttacgaaagttttaccaattcatgcaaat
catcccttatcagttggtattcgcactctaattacagtcctcgatatccgcgatgaaaat
ggtctattagccaagtttcaatcaaaattactcagatccactcgcttaaccgaactattc
gcacaagggcacgatttagcagtagttagtgcctgggcaggtcataaacaatttgctact
accgctacccactataccgaagtcagttgcaacctgatagagaaggaaactggacatatc
cagaaagcacttgttaacagtaacggtcatcgtattctctatgaatcatttcctaagtct
ttttgggaaacccccatttcccacaaactcgaactaacccaaacccatgttaatacacct
atctatggttattgtggtctaccgcttaaccaagactgtcataaatctagagcttgttat
acctgtgagtgctttgtcgctactattgaaaaactcccccaatacatcaacacacttaac
gagcttcgagcaaaattaattaaagctatgtcagtagggcaggaagtactggtcgagcaa
ttcggcagacaagcagaacaacttgacaaaatcattgctagtttgcaacagggggcagca
tga
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