Chamaesiphon minutus: Cha6605_2077
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Entry
Cha6605_2077 CDS
T02414
Name
(GenBank) bacterial nucleoid DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
cmp
Chamaesiphon minutus
Brite
KEGG Orthology (KO) [BR:
cmp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cmp03032
]
Cha6605_2077
03036 Chromosome and associated proteins [BR:
cmp03036
]
Cha6605_2077
03400 DNA repair and recombination proteins [BR:
cmp03400
]
Cha6605_2077
DNA replication proteins [BR:
cmp03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Cha6605_2077
Chromosome and associated proteins [BR:
cmp03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
Cha6605_2077
DNA repair and recombination proteins [BR:
cmp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
Cha6605_2077
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_bac_2
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
AFY93172
UniProt:
K9UDH9
LinkDB
All DBs
Position
2136661..2136912
Genome browser
AA seq
83 aa
AA seq
DB search
MSIDKQELVRRVSQRVERETGMVETVIDATLEEIYESLQHGDSVSLRNFGTFYVRVEPKC
WVFKFNPSQRLRKLFGWASTSKT
NT seq
252 nt
NT seq
+upstream
nt +downstream
nt
atgtctattgataaacaggaactagtccgccgcgtgtcccaacgagtcgagcgagaaact
ggcatggtggaaacggtcatcgatgcgacgctcgaagaaatttatgaatcactccaacat
ggcgatagtgtctcgttgcggaactttgggactttttacgtcagggtcgagccgaaatgt
tgggtgtttaagtttaacccttctcaacgattgcggaagttatttggttgggcttctact
tccaaaacatga
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