Chamaesiphon minutus: Cha6605_3395
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Entry
Cha6605_3395 CDS
T02414
Name
(GenBank) superfamily II RNA helicase
Organism
cmp
Chamaesiphon minutus
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Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
Ski2_cyano_M
DEAD
ResIII
DEXQc_Suv3
Helicase_C
nSTAND3
IstB_IS21
AAA_22
MSC_0620_UU052
nSTAND_NTPase5
ATPase_2
AAA_30
MTR4_beta-barrel
PhoH
RAG2
Motif
Other DBs
NCBI-ProteinID:
AFY94394
UniProt:
K9UJL9
LinkDB
All DBs
Position
complement(3567300..3569966)
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AA seq
888 aa
AA seq
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MTTSAITTEQLKDIFPFPLDRFQLQAVDALNAGKSVVVCAPTGSGKTLIGEYAIHRALRQ
GRRVFYTTPLKALSNQKYRDFRAEFGEGNVGLLTGDISIDRDAPIVVMTTEIFRNMLYGT
RIGEVGTSMVGVEAVVLDECHYMNDKQRGTVWEESIIYCPPHIQLVALSATVANSKQLTE
WIGAVHGSTELIYSDFRPVPLEFHFVNPKGILPLLDPNTAKLNPKLKTHRPTGSRKAEDV
PSIGFVVSKLAEREMLPAIYFIFSRRGCDKAVAEMATMQLVTPAESALLKIRIDDFLDKN
PEAARAGQVEPLYKGVAAHHAGILPAWKSLVEELFGMGLIKVVFATETLAAGINMPARTT
VISSLSKRTDQGHRLLTASEFLQMAGRAGRRGKDVVGYVVATQTRFEGAKEASDFATSAP
DPLVSQFTPTYGMVLNLLQTHTLEEARELVERSFGHFTKTLHLLPQQQSIGDIKKELSTL
QESLNKIDPNVLADYETAHSQLKLDQNQLKNLQLYTEQVQAGQVSKQLPAAFPGTILSLK
GKHVPVATPLPAVLVTKIAGSGYKPALVCLGQDNRWYVVNHQDVVAVHKHWSEYGGKQRV
PQVVSLLPPADMPLKPGQVRKGMTLTAEIAQSIPNLEPPATAELTAQVKTVAELKTKLEN
HPVWEWGNPATLLKRYRRQATLEQEIKDLQDTLQTQLDRHWQEFLNLIEVLRQVNGLQGV
LPTRIGEAAAAIRGDNELWIALALMSGYLDTLDPHHLAAVICALVSETPRSDSWTNYDPA
DEVVMTLSALRGSRRQLFQIQRRYQVALPVWMEYELVGIVENWALEVSWTELCSNTNLDE
GDIVRMLRRTVDLLSQIPYVPHASDALQANARRAIQLIDRFPINESIA
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atgaccacctctgctattactaccgagcaattaaaagatatatttccatttccactcgat
cggtttcaacttcaggcggtagatgcactcaatgccggaaaatcggtggtagtctgcgct
ccaactggttcgggcaaaacgttaattggtgaatatgccattcatcgcgccctgcgacag
ggacgcagagtcttttataccaccccgctcaaagctctctccaatcaaaagtatcgagat
ttcagggcggaatttggtgaaggtaatgtcggcttgctgactggggatatttcgatcgat
cgggatgcgccgatcgtggtgatgaccaccgaaatctttcggaatatgctatatggtacc
cgcatcggcgaagtcgggacttcgatggtaggtgtcgaagccgtggtgcttgacgagtgc
cattatatgaatgacaaacagcgcggtaccgtctgggaagaatcgattatttactgtccg
ccgcacattcagctcgtcgcgctctctgccaccgttgccaatagcaaacaattgaccgaa
tggatcggtgccgttcatggtagcaccgaactgatctattcggactttcgccccgtcccc
ttggaatttcactttgtaaatcccaaaggaattttgccattactcgatcctaatactgcc
aaactcaaccccaaactcaaaacccatcgtccgactggtagccgcaaagctgaagatgtc
cccagcatcggctttgtcgtcagcaagctcgccgagcgggaaatgttacccgccatctac
tttatcttcagtcggcgcgggtgcgataaagctgtcgccgagatggcgacgatgcaatta
gtgactccggctgaatcagctttactcaagatccgcatcgatgactttctcgataaaaat
cccgaagcagcacgggcgggacaagtagaaccactgtataaaggtgttgccgctcaccat
gcaggcattctccccgcgtggaaatcattggtagaagaactatttggcatgggtttgatc
aaagtcgtatttgcgacagaaaccctcgccgccgggattaatatgcccgcccggacgaca
gtaatttccagcctctccaagcgcacagaccaaggacatcgcctgctgacggcatccgaa
tttctccagatggccggacgtgccggacgacgcggtaaggacgtggtgggctatgtagtg
gccactcagacgagatttgaaggtgccaaggaagcaagcgactttgccacatctgcaccc
gatcccttagtgagtcaatttacgcccacttatgggatggtcttaaatctactccaaact
cataccttagaggaagctagagaactagtcgaacgcagtttcggacattttaccaagacg
ctccatctgttgccccaacagcagagcatcggcgatatcaaaaaggaattgagcactctc
caggaaagtttgaataagatcgatcctaatgttttagctgactatgaaaccgcccattct
caacttaaattagaccaaaatcagctcaaaaatctccaactctataccgaacaagtccaa
gccggacaagtcagcaaacaattacccgcagccttcccaggcacgatcctcagcctcaaa
ggcaaacacgtccccgtcgctacgccattacccgccgtcctcgtcaccaaaattgccgga
tctggttacaaacccgctctagtctgtctgggacaagataaccgctggtacgtcgtcaat
catcaggatgtcgtcgccgtccacaaacattggtcggaatatggcggcaaacagcgggta
ccgcaggtagtatccctgctcccacctgcggatatgcccctcaaacccggacaagtccgc
aagggaatgaccctaactgccgaaattgcccaaagcatccccaatctcgaaccgccagcc
accgccgaattaacagcccaagtcaaaaccgtcgccgaactcaaaaccaagctcgaaaat
catcccgtctgggaatggggcaatcccgccacattgctcaaacgctaccgccgccaagcc
acattagaacaggagattaaagatctccaagatacactgcaaacccaactcgatcgacat
tggcaagaatttctcaatctgattgaagtattgcgtcaagtcaatggtttgcagggcgtc
ctccccacccggattggcgaagccgccgccgccattcgtggggataacgagctatggatt
gccctcgcgctgatgtctggttatctagatactttagatccgcaccatttagccgcagtc
atctgcgccctcgtatcggaaaccccccgctccgacagttggacgaattacgatccggct
gatgaagtagtaatgaccctcagtgccctacgcggctctcgccgccaactattccaaatc
caacgtcgctatcaggtagctctccccgtctggatggagtacgagctagtcggcatcgtc
gaaaactgggcgttggaagtatcctggacggaattgtgtagcaataccaatctcgatgag
ggcgatatcgtgcggatgttgcgtcgcacagtggatttattgtcgcagattccctatgta
cctcatgctagcgatgctttacaagcaaatgccagacgagcgattcaattaatcgataga
ttccccattaacgaatcgatcgcgtaa
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