Chamaesiphon minutus: Cha6605_3474
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Entry
Cha6605_3474 CDS
T02414
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cmp
Chamaesiphon minutus
Pathway
cmp03420
Nucleotide excision repair
cmp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cmp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Cha6605_3474
03430 Mismatch repair
Cha6605_3474
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmp03400
]
Cha6605_3474
Enzymes [BR:
cmp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Cha6605_3474
DNA repair and recombination proteins [BR:
cmp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cha6605_3474
MMR (mismatch excision repair)
Other MMR factors
Cha6605_3474
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
DEAD
ResIII
CarD_TRCF_RID
AAA_22
DUF3553
Motif
Other DBs
NCBI-ProteinID:
AFY94466
UniProt:
K9UJ44
LinkDB
All DBs
Position
complement(3655505..3657850)
Genome browser
AA seq
781 aa
AA seq
DB search
MTANTNFLAHLNSSQRRSVEHYCGALLVVAGAGSGKTRALTYRIANLIRTHHVDPAHILA
VTFTNKAAKEMRSRIELLFAQQQAELKFGKPWGALDDYQQTQLRSHVYKTIIKDLWIGTF
HGLFSKVLRFDIEKYQDEKGRTWNKNFSIFDDSDCQGLVKQIVVKQLDLDDKKFEPRAVR
YAISTAKNQGLSPDEYSKQQNDYRGRVISDVYKHYQDALCANNALDFDDLLLVPVQLFRQ
NAQVLDYWHRKFRHILVDEYQDTNRTQYDLIQLLVTNGVDSKTFNNWEHRSIFVVGDADQ
SIYSFRAADFTILMNFQDDFGDSMPDDRTETMVKLEENYRSRENILAAANHLIQHNTQRI
DKILKATRGEGEPIFLYKADNEIDEAEFVVSQIRKLLRENPELNYGNFAALYRTNAQSRP
IEDAFVRSQIPYTIVGGLKFYDRREIKDIVAYLRAIANPNDTVSLLRVINTPRRGVGQTT
IDNLQNAAQQLGVPLWEILNDETSVKTVAGRSSKGVLNFAEIINKWRSESETRPVVDIVT
GIVEDTGYVHELQTQGTDEALERIQNVQELVNATIQFQEESDEPSLEAYLASAALSSDLD
NLQEGKEAVSLMTLHASKGLEFPIVFLVGLEAGLFPSFRSLNDPMAVEEERRLCYVGITR
AQEMLYLSHARERRLYGSREPAIRSQFIGELPPELLNSNLRTKIKAQTPDRTSPKDPKTV
GKTNAQTTGWRVGDRVIHRSFGVGQISHVFGTGNKQSIAIKFPNLGQKIVDPKIAGLQKI
D
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atgactgctaataccaacttcctcgcgcatctcaattcttcccaacggcgttccgtcgag
cattattgtggagccttattagtagtagctggagctggtagcggcaaaactcgcgcactc
acgtatcggattgctaacctaattcgcacccatcatgtcgatccggcgcacattttggca
gttacctttactaataaagcggctaaagaaatgcgatcgagaatcgaattactctttgcc
cagcagcaagcagaattaaaatttggcaaaccttggggcgcgttagatgactatcagcaa
acccaattgcgatcgcatgtctataagacgataattaaagacttatggatcggcacattt
cacggtttgtttagtaaggtattacgatttgatatcgaaaaatatcaagatgaaaaggga
cgtacttggaataagaatttctcgatttttgatgatagcgactgccaagggctagtcaag
caaattgtcgtcaagcagttagatctagatgacaaaaaattcgagccgcgtgcggtgcgg
tatgcaattagtactgccaaaaaccaaggcttatccccagatgaatatagtaagcagcag
aatgactatcggggcagagtaatctcggatgtttataaacactatcaagatgcactgtgt
gcgaataatgctctagactttgacgatctattattagttccagttcaactatttcgtcag
aatgcccaagtgctggattattggcatcgaaaattccgacatattttagttgatgaatac
caagacactaaccgcacccaatacgatttaattcaactattagtaactaatggcgtcgat
agtaaaacctttaacaattgggagcatagatcgatctttgtggtgggcgatgccgatcaa
tctatctattcattccgtgcggcagattttacaattttgatgaattttcaggatgatttt
ggcgatagtatgccagacgatcggactgagacgatggtgaagttggaagaaaactatcga
tcgcgcgagaatattttagctgctgccaatcatctgatccaacataacactcaacggatc
gataaaattcttaaagcgacgcgcggcgaaggcgaaccgatcttcttgtataaggcagat
aatgagatcgatgaagctgaatttgtcgtcagtcaaattcgcaaactattacgcgaaaat
cccgaactgaactatggaaactttgcggcactataccgcaccaatgctcaatcgcgaccg
atcgaagatgccttcgtgcgatcgcaaattccgtatacaatcgtgggtggattaaagttc
tacgatcggcgagaaattaaagatatcgttgcctatctacgcgcgatcgccaatcctaac
gatacggttagtttgctgcgggtgattaatacccccagacgtggtgtcggacaaaccacg
atcgataatctccaaaatgccgcacagcaattaggtgtcccgttatgggaaatcttaaat
gatgaaacttcagttaaaactgtcgccggaagatcgtctaagggcgtacttaattttgcc
gagattattaataagtggcgcagcgaatccgaaactcgtccggttgtcgatatcgtaacg
ggaattgttgaagatactggttacgtccacgaattgcaaacccaagggacagatgaagct
ctcgaacgcattcaaaacgtccaagaattagtcaacgcgacgatccaatttcaagaagaa
agtgatgagccaagtctcgaagcttatctagccagtgccgcccttagctcggatttagat
aatcttcaagaaggtaaagaagccgtctcgctgatgacattacatgcgtctaagggatta
gaatttccgattgtatttttggtgggcttagaagcaggcttattccctagttttcgatcg
cttaacgatccgatggctgtggaagaagaacgccgattatgctacgtaggcatcactcgc
gcgcaagagatgttatatctatctcacgcccgcgaacgtcgcttatatggctctagagaa
cctgccattcgatcgcaatttatcggcgagttgccaccagaattacttaatagcaatctg
cgtacaaaaattaaagcacaaacgcccgatcgcacctcaccaaaagaccccaaaactgtc
ggtaaaactaacgcccaaaccacaggctggcgcgttggcgatcgcgtaattcatcgcagt
tttggggtgggtcaaatttcacatgtatttgggactgggaataaacaatcgatcgctatt
aaatttcccaatctcggtcaaaaaattgtcgatcctaagattgctggacttcagaaaatc
gattaa
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