Chamaesiphon minutus: Cha6605_3812
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Entry
Cha6605_3812 CDS
T02414
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
cmp
Chamaesiphon minutus
Brite
KEGG Orthology (KO) [BR:
cmp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmp03400
]
Cha6605_3812
DNA repair and recombination proteins [BR:
cmp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Cha6605_3812
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
DnaB_C
ChlI
AAA_16
GvpD_P-loop
AAA_22
ATPase_2
nSTAND3
Lon_C
DUF7125
AAA
PIN-TPR-GreABC
NTPase_1
MCM
AAA_5
ABC_tran
AAA_29
Motif
Other DBs
NCBI-ProteinID:
AFY94783
UniProt:
K9UJH2
LinkDB
All DBs
Position
4010140..4011636
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AA seq
498 aa
AA seq
DB search
MAKQPRTSYVCNECGSTSPQWYGKCPICNTYGSLIEQPPPSASRGVGVKAPNARSSDEQP
HPLAALTFPEIIDGEEERWASGFGELDRVLGGGIVPGSLVLIGGDPGIGKSTLLLQTANL
MSKHYRVLYVCGEESGKQVKLRASRLGVEGTKGELTSEEIEANGAAETPKQLTVADGANL
YVQAETDLEEILRELESLRPHVAVIDSIQTVYFPALTSAAGSVAQVRECTAALMKVAKRE
DITLLIVGHVTKEGAIAGPKVLEHLVDTVLYFEGDRFASHRLLRSTKNRFGATHEVGVFE
MVDRGLREVDNPSELFVGDRQGMAPGTAIVVACEGTRPIVVELQALVSPTSYPSPRRAGT
GIDYNRLTQILAVLEKRVGIPLSKLDAYVASAGGLNVSEPAVDLGMAIAIVASFRDRVVA
PFTILIGEIGLGGQVRQVSQLELRLKEAAKLGFKRAIVPKGHQTFPDLGMEIIPVGRVID
AIVAALPAETEVEDIDED
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaacagccccgcacttcctatgtttgtaatgaatgtggatcgacatccccacaa
tggtatggaaaatgcccgatctgtaacacttatggctcgctgatcgaacaaccaccgccg
tctgcttctaggggagttggtgtcaaggctccaaatgctcgatcgagtgacgagcaaccg
catcctctagcagccctaactttccccgaaattatcgatggtgaagaagaacgctgggct
tctgggtttggcgaactcgatcgcgtgttgggcggtgggatcgtaccgggttcgctagtc
ttaatcggtggcgatccagggattggtaaatctaccctgttgcttcagactgccaatctc
atgtccaaacattatcgagtattatatgtttgcggcgaagaatcgggcaagcaagtcaaa
cttagggcttctcgactgggagttgaaggcaccaaaggcgaactcactagcgaggaaatc
gaggcaaatggagcggctgagacaccgaaacaactaacggtagccgatggcgcaaattta
tacgtccaagccgagacagatttagaagaaattctgcgagaattagaatcgctgcgccct
catgtggccgtaatcgatagtattcaaacagtctatttccccgcactgacatctgctgct
ggctcggtggcgcaggtgcgagaatgtaccgcagcgttgatgaaagttgccaaacgagaa
gacattactctgttaattgtcggacatgtgaccaaagaaggggcgatcgcggggccgaaa
gttctagaacatttagtcgataccgttttatattttgaaggcgacaggtttgcctcccat
cgtctcctgagatccaccaaaaatcgctttggagccactcatgaagtgggagtgttcgag
atggtcgatcgaggattgagagaggttgacaacccttctgagctgtttgtaggcgatcga
caagggatggctcctggtacggcaattgtcgttgcttgcgaaggaactagaccgatcgtg
gtcgagttacaggcattagtcagtccgactagctatccatcgcctaggcgggcgggtacg
ggcatcgattacaaccgcctgacgcaaattttggcagtactcgaaaaacgcgtcgggatt
ccactctcgaaattagatgcttatgtggcatccgcaggagggttaaatgtctccgaacca
gcggtagacttagggatggcgatcgcgatcgtggcgagttttcgcgatcgagtggtggct
ccctttacgatcctaatcggtgaaatcggcctgggcgggcaggtacgtcaagtatcacaa
ttagagttacgcctcaaagaagcagcgaaattaggattcaaacgcgcgatcgtccccaaa
ggacatcaaacttttcccgatctggggatggaaattattcccgtgggacgagtaatcgac
gcgatcgtcgctgcccttcccgccgagacagaagtagaagatatcgacgaagattga
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