Chamaesiphon minutus: Cha6605_4251
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Entry
Cha6605_4251 CDS
T02414
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
cmp
Chamaesiphon minutus
Pathway
cmp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cmp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Cha6605_4251
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmp03019
]
Cha6605_4251
03016 Transfer RNA biogenesis [BR:
cmp03016
]
Cha6605_4251
Enzymes [BR:
cmp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Cha6605_4251
Messenger RNA biogenesis [BR:
cmp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Cha6605_4251
Transfer RNA biogenesis [BR:
cmp03016
]
Prokaryotic type
tRNA degradation factors
Cha6605_4251
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
KH-I_KHDC4-BBP
KH_2
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
AFY95193
UniProt:
K9UKK6
LinkDB
All DBs
Position
4472169..4474310
Genome browser
AA seq
713 aa
AA seq
DB search
MAEINKSISFDGRDIRLKVGVFAPQAGGCVLIESGDTSVLVTATRAKGREGIDFLPLLVD
YEERIYAAGRIPGGFLRREGRAPEKVTLISRLIDRPMRPLFPDWLRDDIQIVATTMSLDE
LVPPDVLAVTGASIATLLAQLPFNGPMAAVRVGLVGDDFIINPTYREIQIGDLDLVVAGT
PDGVIMVEAGANQLPEQDIIEAIDFGYEAVQELITAQRELIAELGIEIVHAQKPSTDETL
ENFLTDRTKESIKVILGKYEPDKNIRDAELDEVKAKAVEEIATLPETDPIQVAAASDSKA
VSTLFKGITKKMMRQQVIETGRRVDGRTLDQVRPISCFVGVLPRRVHGTGLFNRGQTQVL
SACTLGTPGDAQDLGDDLNPENTKRYIHHYNFPPYSVGETKPMRAPGRREIGHGALAERA
LIPVLPSKDEFPYVLRVVSEVLSSNGSTSMGSVCGSTLALMDAGVPITKPVSGAAMGLIK
EGEEVRILTDIQGIEDFLGDMDFKVAGTDTGITALQMDMKISGLPMTVIADAINQARPAR
LHILEKMLAAIDKPREELSPFAPRLLTFKIEPELIGLVIGPGGKTIKGITEETGAKIDID
DDGTVTVSAVDNDKAKRAIQIIQGLTRRLNEGDIYAGRVTRIIPIGAFVELLPGKEGMIH
ISQLADYRVGKVEDEVGVGDEVIVKVREIDNKGRVNLTRLGIHPDEAAAARKG
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atggcagagataaataagtcaatatcctttgacggtagggatattcgacttaaggttgga
gtattcgcaccccaagctggtggttgcgtcttaatcgaatctggcgataccagcgtgtta
gttaccgccacccgtgcgaaaggacgagaaggaattgatttcctaccgttacttgtagat
tatgaagaacggatctatgcagccggacgtattccaggtggtttcttacgacgcgaaggc
cgagcaccagaaaaagttacgctcattagtcggttgatcgatcgacccatgcgtccgtta
tttcctgattggttgcgcgatgatattcaaatcgtcgcgaccacgatgtctttagacgaa
ttagtccccccagacgtcctggcagtcactggagcttcgatcgctaccctgttggcacag
ctcccatttaatggccccatggcagcagtacgggtcggtttagtcggcgatgactttatc
atcaatcccacctatcgcgaaattcaaatcggcgatctagatctagtcgttgcgggtact
cccgatggcgtgattatggtcgaagcgggtgccaatcagttacccgaacaagacatcatc
gaagcgatcgattttggttatgaagccgttcaagagctaattaccgctcaacgcgaatta
atcgccgaactaggcatcgagatcgttcatgcccagaaaccttctaccgacgagacttta
gagaacttcttaaccgatcgcaccaaagagagcatcaaagttattctcggcaaatacgag
ccagataaaaatattcgcgatgccgaactagatgaagtcaaagccaaagcagtagaagag
atcgctactttaccagaaaccgatccgattcaagttgccgcagctagcgatagtaaagct
gtgagtaccctgttcaaaggcatcaccaaaaaaatgatgcgccaacaggtgatcgaaacc
ggacggcgcgtagacggacggacgctcgaccaagtacgcccgatttcttgtttcgtcggc
gttttaccccgccgcgttcacggtacgggtctgttcaatcgcggccaaacacaagtcttg
tcggcttgtaccctcggtactcctggcgacgcccaggatctcggcgacgatctcaatccc
gaaaataccaaacggtatattcaccactataatttcccgccttattccgtcggtgaaact
aagcccatgcgtgcccccggacgccgcgaaatcggtcatggtgccctcgccgaacgcgcg
ttgatccccgtccttcccagcaaagatgagttcccctacgtgctccgagtggtctctgag
gtgttatcctccaacggttctacctcgatgggttcggtctgcggttcgaccctcgcattg
atggatgcaggcgtccccattaccaaacccgtcagcggtgcggccatgggattgattaaa
gaaggcgaagaagttcgcattcttactgatatccaagggattgaagacttcctcggcgac
atggactttaaagttgcaggcaccgataccggaattaccgccctgcaaatggacatgaaa
atcagcggtctgccgatgacggtcatcgccgatgccatcaatcaagcacgtcccgcacgc
ttacatattctagagaaaatgttagccgcgatcgacaaaccccgcgaagaactctcaccc
tttgcaccgcgcttactcaccttcaaaattgagccagaactgatcggcttagtaatcggc
cctggcggtaaaactattaaaggaattaccgaagagaccggagctaaaatcgatatcgat
gacgacggtactgtaactgtatcggctgtcgataatgacaaagccaaacgtgcgatccaa
attatccaaggcttaactcgccgtctcaacgagggcgatatctatgccggacgtgtgacc
cgaattatcccgattggtgccttcgtggagctgctaccgggcaaagaagggatgatccat
atctcccaactcgccgattatcgcgtcggtaaggttgaagatgaagtgggcgtcggcgat
gaagtgatcgtcaaggttcgcgaaatcgataataagggtcgcgttaatttaacacgtctg
ggcattcatcccgatgaagctgcggcggcgcggaagggttag
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