Chamaesiphon minutus: Cha6605_4302
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Entry
Cha6605_4302 CDS
T02414
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
cmp
Chamaesiphon minutus
Pathway
cmp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cmp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Cha6605_4302
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmp03400
]
Cha6605_4302
Enzymes [BR:
cmp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Cha6605_4302
DNA repair and recombination proteins [BR:
cmp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Cha6605_4302
Prokaryotic type
Cha6605_4302
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
PTHB1_CtH
Motif
Other DBs
NCBI-ProteinID:
AFY95242
UniProt:
K9UJG1
LinkDB
All DBs
Position
complement(4530503..4531186)
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AA seq
227 aa
AA seq
DB search
MTISSISSDWQQVLATEFEQPYFQKLQDFLATERQTAEIFPAEADVFAAFNLTPYDRVNV
LLLGQDPYHDTNQAHGLCFSVNPGIKVPPSLVNIYKELHADLGCEIPNHGYLVNWAQQGI
LMLNAVLTVRAHTPNSHKDKGWEKFTDAVISKVNQKTAPVIFVLWGAYAQKKLKLIDTSR
HIVIQSAHPSPLSARNGFFGSKPFSAINTALNSIDKPQINWQLAKTI
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgactatctcatcgatttctagtgattggcaacaagttttggcaacagagttcgagcaa
ccatattttcaaaagttacaagattttctagccacagaaagacaaacagcagagatcttt
cccgctgaagcagatgtatttgcagcctttaacttaacaccttacgatcgagttaatgtt
ttattactcggacaagatccttatcacgataccaatcaggcgcatggtttgtgtttttcg
gtcaatccaggcatcaaagttccaccgtctctggtcaatatctataaggaactgcacgcc
gatctcggttgtgagattcccaaccacggctacctggtaaactgggcacagcaaggcatc
ctgatgttaaatgcggtgctgacagttcgcgcacatacacctaattctcacaaagataaa
ggctgggaaaagtttacagatgccgtaattagtaaagtcaatcaaaaaaccgctccagtc
atctttgtcttatggggtgcctacgctcaaaagaaactaaaattaatcgatactagcaga
catatcgtcattcaatctgctcatccttcaccactttcggcacggaatggcttctttggg
agtaaacctttttcggcgattaatacagcgttgaattcgatcgacaaaccgcagattaat
tggcaactagccaagactatctga
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