Chamaesiphon minutus: Cha6605_4726
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Entry
Cha6605_4726 CDS
T02414
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
cmp
Chamaesiphon minutus
Pathway
cmp03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cmp00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Cha6605_4726
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmp03021
]
Cha6605_4726
03400 DNA repair and recombination proteins [BR:
cmp03400
]
Cha6605_4726
Enzymes [BR:
cmp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Cha6605_4726
Transcription machinery [BR:
cmp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Cha6605_4726
DNA repair and recombination proteins [BR:
cmp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Cha6605_4726
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
AFY95642
UniProt:
K9UKL5
LinkDB
All DBs
Position
4996557..4997540
Genome browser
AA seq
327 aa
AA seq
DB search
MAQFQIECVESKTESNQSQYSKFILEPLDRGQGTTIGNSLRRVLLSNLEGTCITAVRVAG
LIRDEKTGVKPGTVNHEFATLVGVRQDVLELLLNMKEVKLKSYTSQPQIGRLNVTGPAEV
TTADFELPSEVEVVDPNQYVATVAEGGKLEMEFRIERGKGYRSVDKFREQGLAMDLLQID
AVFMPVTQVNYSTEDVRIDGAVEKDRLILEIWTNGSLTPQEALSESAKILVDLLNPLKDI
SLESFQPEYPDEEDPSNQIPIEELNLSVRAYNCLKRAQINSVSDLMGYTQEDLLEIKNFG
LKSAEEVIEALEKRLGIKLPHDKSVKV
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
gtggcgcagtttcagatcgagtgtgtcgagtctaagaccgagtcaaatcaaagtcaatat
agtaagtttattctagaaccgctcgatcgcgggcaaggtaccacgatcggtaactcgctc
cggcgggtattgctgtccaacttagaagggacatgcattacagcggttagagtagctgga
ttaattagagacgaaaaaactggcgtcaaacccggtacggtcaatcacgagtttgctacc
ttagtcggcgtccggcaggatgtgttagaactcctgctgaacatgaaagaggtcaagctc
aaaagttacacctcgcagccgcaaattggtcgcttgaatgtaactgggcctgctgaagtg
acaactgccgattttgagttgccttctgaagtagaagttgtcgatcccaaccaatatgta
gctaccgtcgctgagggtggcaaattggaaatggaatttcggatcgagcgcggcaaaggc
tatcgctccgtagacaagttccgcgaacaaggtctagcaatggatttactccaaatcgat
gctgtctttatgcctgtaactcaggttaactacagtaccgaagatgtgcggatcgatggc
gcagtcgaaaaggatcgactgatcctcgaaatctggactaatggtagcctgacacctcaa
gaagcattgagcgaatctgccaaaattttggtcgatctactcaatccgctcaaggacatc
agcttggaatctttccaaccagaatatccagacgaagaagatccctccaaccaaattccg
atcgaagagttaaatctctctgttagagcctacaactgcttaaaacgcgcgcaaattaac
tcagtctccgatttaatgggttacacccaagaagacctcttagaaattaagaacttcggc
ctcaagtcggcagaggaggtgatagaagcactggaaaagcgattggggatcaaactaccc
cacgataaatcagtaaaagtctga
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