Chamaesiphon minutus: Cha6605_4860
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Entry
Cha6605_4860 CDS
T02414
Name
(GenBank) chaperonin GroL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
cmp
Chamaesiphon minutus
Pathway
cmp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cmp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Cha6605_4860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmp03019
]
Cha6605_4860
03110 Chaperones and folding catalysts [BR:
cmp03110
]
Cha6605_4860
03029 Mitochondrial biogenesis [BR:
cmp03029
]
Cha6605_4860
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cmp04147
]
Cha6605_4860
Enzymes [BR:
cmp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Cha6605_4860
Messenger RNA biogenesis [BR:
cmp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Cha6605_4860
Chaperones and folding catalysts [BR:
cmp03110
]
Heat shock proteins
HSP60 / Chaperonin
Cha6605_4860
Mitochondrial biogenesis [BR:
cmp03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Cha6605_4860
Exosome [BR:
cmp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Cha6605_4860
Exosomal proteins of other body fluids (saliva and urine)
Cha6605_4860
Exosomal proteins of breast cancer cells
Cha6605_4860
Exosomal proteins of colorectal cancer cells
Cha6605_4860
Exosomal proteins of bladder cancer cells
Cha6605_4860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AFY95773
UniProt:
K9UMB4
LinkDB
All DBs
Position
complement(5138473..5140149)
Genome browser
AA seq
558 aa
AA seq
DB search
MAKIIAFNEESRRALERGVNALADAVKITLGPKGRNVLLEKKFGAPQIVNDGITVAKEIE
LTDPLENTGARLIQEVASKTKDLAGDGTTTATVLAQEMIREGLKNVAAGSNPMGIKRGMD
KTVAMLVAEIAKLAKPVEGKGIAQVASVSAGNDPEVGEMISAAMDKVTKDGVITVEESKS
LTTELDVVEGMQIDRGYLSPYLVTDQERMVVEFDDALILITDKKINSIQDLVPILEKVAR
AGKPLLIIAEDLEGEALATLVVNKARGVLSVAAIKAPSFGDRRKAMLQDIAILTGGQMIS
EEIGLSLDTASLEMLGNAAKITIDKENTTIVSNNSNSGDLQKRIAQLKQQLAETDSAYDT
EKLQERIAKLAGGVAVIKVGAATETELKDRKLRIEDALNATKAAVEEGIVAGGGTTLIHL
SDKVTQFKASLANAEEKIGAEIIAKALEAPLRQIANNAGVEGSVVVEQVRAAADNIGYNA
ATNVFEDLLAAGIVDPAKVVRSSLQNAVSIAGLVLTTEALVVEKPEPKSAAPDMGGMGGM
GGMGGMGGMGGMGGMGMM
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaatcatagcgtttaacgaagaatcccgtcgcgcgctcgaacggggtgtcaac
gccttggctgatgcggtcaagattactctaggccccaaaggacgtaacgtcctgttagag
aagaaatttggcgcaccgcagatcgttaacgatggaattaccgtcgccaaagaaatcgaa
ttgaccgatcctctcgaaaatactggggcaagactaattcaggaagttgcttccaaaact
aaagatttggctggagatggtaccactacagcaaccgtcttagcgcaagaaatgattcgc
gaaggtcttaaaaacgttgctgctggtagcaatccgatggggatcaagcgcgggatggac
aaaactgtcgccatgttggttgcagaaattgccaagctagccaaacccgtcgaaggtaaa
ggcatcgctcaggtggctagtgtctcggctggtaacgatccagaagtcggcgagatgatt
tctgctgccatggacaaagtaaccaaagatggcgtcattacagtcgaagaatcaaaatcg
ctgactaccgaattggatgtagtcgaagggatgcaaatcgatcgtggttatctctctcct
tacttggttaccgaccaagagcggatggtggttgaatttgacgatgcgctgattctgatt
accgacaaaaaaatcaattcgattcaagatttagttcccattcttgaaaaagttgcccgc
gcgggtaaacccctattaatcattgctgaagaccttgaaggcgaagctctagcgacttta
gtagtcaataaagcgcgtggcgttctcagcgttgctgcgattaaagctcccagcttcggc
gatcgtcgtaaagcgatgttacaagacattgcaattctcactggcggacagatgatttct
gaagaaatcggtctgagcttggatactgctagtctcgaaatgctaggtaatgccgctaaa
atcacgatcgataaagaaaacaccacgatcgtttctaacaatagcaatagtggcgatctc
caaaaacgcatcgcgcaactcaagcaacaactcgctgagacagattcagcttacgatacc
gaaaaacttcaagaacggattgccaaattagctggtggtgttgcggtaattaaagtcggt
gcggcaaccgaaaccgaactcaaagatcgcaaactgcggatcgaagacgccctcaatgct
actaaagcagccgtagaagaaggcatcgttgctggtggcggtactacattgatccacctc
tctgacaaagtgacccaattcaaagctagtctggctaatgccgaggaaaaaatcggtgcg
gagattattgccaaagctctcgaagcacctttgcgtcaaatcgccaataatgctggggta
gaaggctcggtagttgtcgaacaagtccgtgctgctgccgataatatcggttacaacgct
gcgactaatgtctttgaagacttactggctgcggggattgtcgatccggctaaagtcgtc
cgctcgtccttacaaaatgcggtttcgattgcaggtttagtcctgacgaccgaagctctc
gtcgtcgagaagcccgaacctaagtctgctgcacccgatatgggcggcatgggcggcatg
ggcggcatgggcggtatgggtggtatgggtggtatgggcggtatgggtatgatgtag
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