Chamaesiphon minutus: Cha6605_5013
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Entry
Cha6605_5013 CDS
T02414
Name
(GenBank) transcriptional regulator
KO
K21703
LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
Organism
cmp
Chamaesiphon minutus
Brite
KEGG Orthology (KO) [BR:
cmp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cmp03000
]
Cha6605_5013
Transcription factors [BR:
cmp03000
]
Prokaryotic type
Helix-turn-helix
LysR family
Cha6605_5013
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PBP_like_2
MarR_2
HTH_45
HTH_30
HTH_24
HTH_5
HTH_20
HTH_28
HTH_50
PBP_like
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
AFY95919
UniProt:
K9UP04
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All DBs
Position
5311447..5312370
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AA seq
307 aa
AA seq
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MKQATIHQLHVLEAIARHNSFTRAAEELNLTQPTVSQQMKQLTKIVGIPLVEQLGKRFYL
TEAGKEVLAASQEISGRLELLENSLNELKGLEKGHLSLATTTTAKYFVPRLLGTFKRQHP
AIELSLNITNQAQVLDRLAHNQDDLYFTGRPPKELDIELRPILPNPLVVVAPINHPLARE
QKTISLKRLAQEPFIMRESGSGTRAIVEQFFADNRLEIKTVMEMSSNEAIKQGIVGGLGL
SILSLHCLSLAVPGGPLTYLNVEGFPIQQQWYVIYPSGKQLSLAAQTFLDFLLDEGKAIV
EGRLDHS
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
gtgaaacaagccacaatccatcagttacatgtgttagaggcgattgcgcggcacaatagt
ttcacccgtgctgccgaagaattgaacctcacacagccgacagtatcccaacaaatgaag
caactgactaaaattgttgggatacctttagtagaacaattaggtaaacgcttttatctg
acagaagcaggtaaagaagtgcttgccgccagtcaagaaatttcgggtcgcctcgaatta
ctcgaaaacagtctgaatgaattaaaaggtttagaaaaaggccacttgagcctagccacg
acgacgacagctaagtacttcgtaccgagactgctgggtaccttcaaacgacagcatcca
gccatcgagctgagtctcaatattaccaatcaagcccaagtactcgatcgactcgctcac
aatcaagacgatctgtattttacgggcagaccgcccaaagaacttgatatcgaattgcgc
cccatcttacccaatcccttagttgtagtcgctcctatcaatcatccgctcgcccgcgag
caaaaaacgatttcgctcaagcgattggctcaagagccatttattatgcgcgaatctggc
tctgggactcgtgccatcgtcgaacaatttttcgccgacaatcgtctggaaataaagacc
gtgatggaaatgagcagcaatgaagcgatcaaacaagggattgttggcggtttggggcta
tcgatattatccttgcactgcctatcgttagcagtgccgggtggccctttaacttatcta
aatgttgaaggttttcccattcaacagcagtggtacgtaatttatccttccggcaaacag
ttatcccttgccgctcaaacattcctggattttttactcgatgaaggtaaagccatcgtc
gaaggtaggttagaccattcgtga
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