Chamaesiphon minutus: Cha6605_5532
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Entry
Cha6605_5532 CDS
T02414
Name
(GenBank) RNA polymerase sigma factor, sigma-70 family
KO
K03090
RNA polymerase sigma-B factor
Organism
cmp
Chamaesiphon minutus
Brite
KEGG Orthology (KO) [BR:
cmp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmp03021
]
Cha6605_5532
Transcription machinery [BR:
cmp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Cha6605_5532
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_24
GerE
HTH_23
HTH_3
HTH_11
MarR_2
KORA
HTH_20
Sigma70_ECF
HTH_38
HTH_Crp_2
Phage_antitermQ
Motif
Other DBs
NCBI-ProteinID:
AFY96411
UniProt:
K9UPQ6
LinkDB
All DBs
Position
complement(5854630..5855403)
Genome browser
AA seq
257 aa
AA seq
DB search
MTTVLECDLKHHSLQLLREYQQTGKARLRNQIVELNLGLVRKEAHYWVSQCKETYDDLLQ
VGSIGLINAIDKFEVSKGYAFSTFAMPYIRGEIQHYLRDKSSVLKMPRKWFALIQQSATI
IKNFQAEYQRQPTETEIAQALDISLIEWQEIKMAYQNRQPVSLDCPVGSDEEANNLADLL
PDKHYQSFQLTQEDRMRVQQSLVSLEQHTRQILEFVFLHDLTQKQVAERMDISVITVSRH
VKKGLNVLKSMLVNNDA
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgactaccgttttagaatgcgatctgaagcaccacagtttacaactattgcgcgaatat
cagcagactggcaaagcaagactgcgcaaccagattgtggaactaaacttgggattggtg
cggaaagaagcacactactgggtgagtcagtgcaaagagacttatgacgatttgctgcaa
gttggcagtatcggactgattaacgcgatcgataaatttgaagtcagtaaaggatatgcc
tttagtactttcgcaatgccctacattaggggtgaaattcaacactatctacgcgataag
agttcggtcttaaaaatgccccgaaagtggttcgcactgatccaacaatcggcaactatt
atcaaaaattttcaagcagaatatcaacgccaacctaccgaaaccgaaattgcccaagca
ttggatatttccctcatcgagtggcaagaaattaaaatggcgtaccaaaaccgccagcca
gtgagtttggactgtcctgtcggcagcgacgaagaagcaaataacctcgccgatctttta
ccagataaacactaccagagctttcaactgactcaggaagatcggatgcgcgtccaacaa
agtctcgtctctctcgaacaacatacccgccaaattctcgaatttgtcttcctccacgat
ctgacgcaaaaacaagtcgctgagcggatggacattagtgtcatcaccgtatctcgccat
gtcaaaaagggacttaacgtgctcaagtcaatgttggttaataatgatgcctag
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integrated database retrieval system
