Chamaesiphon minutus: Cha6605_5624
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Entry
Cha6605_5624 CDS
T02414
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
cmp
Chamaesiphon minutus
Brite
KEGG Orthology (KO) [BR:
cmp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cmp03016
]
Cha6605_5624
Enzymes [BR:
cmp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
Cha6605_5624
Transfer RNA biogenesis [BR:
cmp03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
Cha6605_5624
Prokaryotic type
Cha6605_5624
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B
Lactamase_B_4
Motif
Other DBs
NCBI-ProteinID:
AFY96495
UniProt:
K9UNU3
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All DBs
Position
complement(5943404..5944339)
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AA seq
311 aa
AA seq
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MQITFLGTSSGVPTRARNVSSIALNLPQRAEVWLFDCGEATQHQLLRCDVKISQIRRIFV
THLHGDHIFGLMGLLATYGMAGSPDRIDIYGPKGLDEYLRACQKYSYTHFNYPIKVHTIE
PGVVHQEADFTVTCIPLKHKVPAYGYRVSETDKSGRFNLEKAKELGIPSGPIYGKLKNGE
VVTLADGRVINGRDLCGETEIGRKFVYCTDTVFCENSIELAADADVLIHESTFAHEDAEM
AFDRLHSTSTMAAQVALGAGAKELILTHFSPRYAPGNPIVLDDLLQAARAIFPQTKMAYD
LMTHEIARRIN
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
gtgcaaatcaccttccttggcacatcgtcaggtgtccccacaagggcgcgcaatgtttct
agtatcgcactcaatctcccccaacgagcggaagtatggctattcgattgtggtgaggct
acccaacatcagttgttacgctgcgatgtcaaaattagccagattcggcgcatctttgtc
acgcatttgcatggcgatcatatttttgggctgatgggattgctggctacttatgggatg
gcaggtagtccggatcggatcgatatttatggccctaaaggattagatgagtatctacgg
gcgtgtcaaaagtattcttacactcattttaactatccgattaaggtacacacgatcgag
ccgggagtggtgcatcaggaggcagattttaccgttacttgcatcccgctcaagcacaag
gtgccagcctatggttatcgggtgagtgaaaccgacaagtcaggaagattcaatctagag
aaggctaaagaattagggattccgtcagggccgatttatggcaagctcaaaaatggtgaa
gtcgttactctagcagatggtagggtaattaacggtcgcgatttatgtggcgagacagaa
atcgggcgcaaatttgtctattgtaccgataccgtattctgcgaaaattcgatcgaatta
gcagcagacgctgatgtgttgattcatgagtctacattcgcccatgaggatgccgaaatg
gccttcgatcggctgcattctacctcgacgatggccgctcaagtcgctttgggtgcggga
gctaaggagctgattttgactcattttagcccccgctatgcaccgggaaatccgatcgtg
ttagacgatttgttgcaagccgcacgcgcgatttttccccagactaagatggcttacgat
ctgatgactcacgaaatagcacggagaattaattaa
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