Chamaesiphon minutus: Cha6605_5688
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Entry
Cha6605_5688 CDS
T02414
Name
(GenBank) uracil-DNA glycosylase, family 4
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
cmp
Chamaesiphon minutus
Pathway
cmp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cmp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Cha6605_5688
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmp03400
]
Cha6605_5688
Enzymes [BR:
cmp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Cha6605_5688
DNA repair and recombination proteins [BR:
cmp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Cha6605_5688
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AFY96545
UniProt:
K9UNZ2
LinkDB
All DBs
Position
complement(6000065..6000766)
Genome browser
AA seq
233 aa
AA seq
DB search
MSSESQLNLFGQLEVSSPVESLPANRFELIPTSSNIPIPSGTYDNLTQLASHCQVCHRCE
LGNTRINAVVGRGNEKAPILIVGEGPGQNEDEQGLPFVGRSGQLLEKILAAVKLSIERDV
YICNVVRCRPPENRVPLPAEVAACKPYLLEQIRLVDPKIILLTGATAVKAITGKKDGITK
IRGTWIEWEGRWCMPIFHPAYLLRNPAPDVGKPKWLMWQDIQAIRAKLDELSA
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcagaatctcaattaaacctattcggtcaactcgaagttagttcgcctgtagaa
tcattaccagctaatagattcgagctgattcctactagtagtaacattccgattccctcc
ggtacgtatgacaatctcacgcaactagccagccattgccaagtgtgtcatcgctgtgaa
ttggggaatacgcgaattaatgccgtcgtgggtagaggtaacgaaaaagcaccgatcttg
attgtgggggaagggccagggcaaaatgaggacgaacaaggtttgccatttgtcggtcga
tcgggtcaattgctcgaaaaaattctggccgctgttaaactgtcgatcgagcgcgacgtg
tatatctgcaatgtcgtccgctgtcgtccgcccgaaaatcgcgtcccgctacctgcggaa
gttgccgcttgcaaaccctatctactcgaacaaatccggctggtagatcccaaaattatc
ctgctcacaggtgccacagccgtcaaagcaattacgggtaaaaaagacggaattaccaaa
attcgcggcacttggatcgaatgggaaggcagatggtgtatgccgatttttcacccagct
tatttactgcgaaatcccgcgccagatgtgggcaaacccaagtggttgatgtggcaagat
attcaagccatccgcgccaaattagacgaactcagtgcgtaa
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