Chamaesiphon minutus: Cha6605_6252
Help
Entry
Cha6605_6252 CDS
T02414
Name
(GenBank) DNA/RNA helicase, superfamily II, SNF2 family
Organism
cmp
Chamaesiphon minutus
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
DUF3670
Helicase_C
ResIII
DEAD
DEAD_2
Spectrin_3
Motif
Other DBs
NCBI-ProteinID:
AFY97078
UniProt:
K9UQW5
LinkDB
All DBs
Position
pCHA6605.01:complement(267614..270769)
Genome browser
AA seq
1051 aa
AA seq
DB search
MKILHGTWIPNSGDEFIQAGNFYLWVETDAPPKQQKDRAANRHPQQLNKDDLSAFLSDEL
GIAPKNASVSRDIITKYFILPSTDVGEASPRENRPLPSVELSRYLETESPAPTTWQIWAI
DCYQVNPIVKLLNDIHFLCLYSTEIQMGADLLCWYHYSQSLRELLHKDRYIPALKYREQA
PPAGKNKKIAPDDRIYPSWEIISPAYETNIQKYLNYLPLVCTGGLDTPDAPIEFYDKETL
LRHFSECLLHHYVANTHIPSTFEKKIANSRLLTGCLNLQNSGIPWTDSQAVAIYKQWQTW
KQKLLVAQNNSTFQLCFQLQEASTQTPDRWYLKFLVAAKQDPSLKLELDDYWQLDSKTKQ
TIHKQFGKEFEKDLLLNLGYAAQIYPQIWQGLETDKPVGFFLSLTAAFDFLAQSAWVLED
AGYKTIVPAWWTPQGRARAKLRLKAAPKKSGKSKADKGLFHLVNLIDYRYELAIGDEQIT
PQEWQKLVDAKTPLIHFRGQWMELDLAKMQQMLQFWQSHQDTQPELTLLELIQKTAAANE
ELEVETEDSLAAMMANLHDPSQLEPIENLPLLQGTLREYQKRGVAWIQYLERLGLNGCLA
DDMGLGKTIQVIATLIAERANLGKISPTLLIAPTSVLGNWGKEIEKFAPHLSVKIHHGSD
RIQELTAFKTATRACDVVITSYTLVRKDSKLLQAVNWHRIVIDEAQNIKNPAAEQTKAIL
KLPAARRLALTGTPVENRLLDLWSIFNFLNPGYLGKEAQFRKSFEIPIQKDRNQVQSIVL
KKLVQPFILRRVKTDKTIIKDLPDKVEHKQYCNLTREQASLYEAVVKDVIEQLETAEGIG
RKGLILSTLMKLKQICNHPRQFLQDNSEFSVNRSHKLQRLGEMLEEITAEGESLLIFTQF
TEIGEALQQYLKHIGYRTYYLHGGTSRPKREQMITEFQDPETEPSAFVLSLKSGGVGITL
TKANHVFHFDRWWNPAVEDQATDRAFRIGQQKNVFVHKFVTLGTLEERIDETIENKKKIA
SSIVGADESWLTELDNESFKKLIALNKQTVL
NT seq
3156 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattctgcacggtacatggattcccaactcaggtgatgaatttatccaagcagga
aacttttatctgtgggtagaaaccgatgcgccgcccaaacaacagaaagatcgggcggca
aatagacacccccagcaattaaacaaagacgatctctcagcatttttaagcgacgaatta
gggatcgctcccaagaatgcctcagttagtcgagatattatcaccaaatattttatcctc
cccagcaccgacgttggcgaagcctctcccagggagaatcgacccttaccctccgtcgaa
ctcagccgctatctagaaacagaatctcccgccccaacaacctggcaaatttgggcgatc
gattgttatcaagtcaacccaattgttaaactgctcaacgacatccattttttatgtctg
tacagcacagaaattcaaatgggagcagatttactctgctggtaccattacagtcaatct
cttcgggagcttttacacaaagatcggtatattcccgctttaaaatatcgggaacaagct
ccacccgcaggtaagaataaaaaaatagctccagacgatcgaatttatcctagctgggag
attatctccccagcttatgaaactaacatccaaaaatatctcaattatctacccctagtt
tgtacgggtgggttagatacgccagatgcacccatagaattctatgacaaagaaaccttg
ctacgtcatttttctgaatgtctcctgcatcattatgtcgccaatacccatattcccagt
accttcgagaaaaagattgccaattctagattgctaactggttgtctcaatctccagaat
tcaggcataccctggacggatagccaagctgtagctatctacaaacagtggcaaacctgg
aagcaaaaattgctagtcgcccaaaataactccacctttcaactctgtttccaactgcaa
gaagcatccacgcaaactccagatcgctggtatctcaaatttctagtcgcagccaaacaa
gatccgtccttaaaactcgaactcgatgactattggcagctcgacagtaaaaccaaacaa
actatccacaaacaatttggtaaagaatttgaaaaagacttactcctgaacttaggttac
gccgcgcagatctatcctcaaatttggcaaggattagaaacagataaacccgtcggcttt
ttcctcagcctcaccgctgcttttgacttcctagcccagagtgcttgggtattagaagat
gccggatataaaacgatcgttcccgcttggtggactcctcaaggtagagctagagctaaa
ctccgcctcaaagccgcaccgaaaaaatctggcaagagtaaagctgacaaaggcttattt
cacctcgtcaatctcatcgactaccgttacgaacttgccatcggtgacgagcaaatcacc
ccccaggaatggcagaaactagtcgatgccaaaaccccactgatccactttcgcgggcaa
tggatggaattagatctggctaaaatgcagcaaatgctccaattttggcagtcgcatcag
gacacccaaccagaattaacgctcttagaattaatccaaaaaactgctgcggctaacgaa
gaactcgaagtcgaaaccgaagatagtttagccgcaatgatggcaaatttacacgatccc
agtcagctcgaaccgattgaaaatctgccattattacaaggaaccttacgcgaatatcaa
aaacgcggggtagcctggattcaatatctcgaacgcttgggtttgaatggttgtctggct
gacgatatgggtttggggaaaactattcaagtaattgccaccttaatcgccgaaagagcc
aatttagggaaaatttcaccaaccctactaatcgccccaacatccgtactgggtaattgg
ggtaaagaaatcgagaaattcgctccgcatctgagtgtaaaaatccatcatggtagcgat
cgcattcaagaattaaccgcctttaaaactgcgactcgcgcatgtgatgtagtcattact
tcctatacgttagtgagaaaagatagtaaattattacaagccgtaaactggcatcgaatt
gtcatcgacgaagcccaaaacatcaaaaatcccgccgccgaacaaaccaaagcaattctc
aaactaccagccgctcgtcgccttgccttaaccggaacccccgtcgaaaatcgcttatta
gatttatggtcgattttcaacttccttaatcctggctatttaggcaaagaagctcagttt
cgcaaatcatttgaaattcccattcaaaaagatcggaaccaagttcaatcgatcgtcctg
aaaaagttagtccaaccgtttatcctccgtcgggttaaaaccgacaaaacaattatcaaa
gacttaccggataaagtcgaacacaagcaatattgcaatctcaccagagaacaagcatcc
ctctacgaagctgtcgtcaaagatgtcatcgagcagctagaaacagccgagggaatcgga
cgaaaaggattgattctatccaccctgatgaaactcaaacaaatttgcaatcatccccgc
caatttttgcaagacaatagtgaatttagcgttaaccgctctcacaaattacaacgattg
ggtgaaatgctcgaagaaattacggctgaaggcgagagcctattaatttttacccaattt
accgaaattggcgaagctctgcaacaatatctcaaacatatcggctaccgtacctattac
ctgcatggcggcacttctcgccccaaacgagaacaaatgataactgaattccaagatccc
gaaaccgaaccttcagctttcgtcttatcattaaaatcaggtggcgtagggattacccta
actaaagccaaccacgtttttcacttcgatcgctggtggaatccggcagttgaagatcag
gcaaccgatcgagcttttagaatcggacaacagaaaaatgtgttcgtgcataagttcgtc
actctaggcaccttagaagaacgcatcgacgaaacgatcgagaacaagaaaaaaattgcc
agttcgatcgtcggagccgatgaatcttggctgacggagttagataatgaaagctttaag
aaattgattgctctgaacaaacaaacagtattgtaa
DBGET
integrated database retrieval system
