Corynebacterium marinum: B840_01800
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Entry
B840_01800 CDS
T03633
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
cmq
Corynebacterium marinum
Pathway
cmq03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cmq00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
B840_01800 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmq03021
]
B840_01800 (rpoC)
03400 DNA repair and recombination proteins [BR:
cmq03400
]
B840_01800 (rpoC)
Enzymes [BR:
cmq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
B840_01800 (rpoC)
Transcription machinery [BR:
cmq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
B840_01800 (rpoC)
DNA repair and recombination proteins [BR:
cmq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
B840_01800 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
AJK67988
UniProt:
A0A0B6TJ81
LinkDB
All DBs
Position
367205..371215
Genome browser
AA seq
1336 aa
AA seq
DB search
MFDVNLFEELRIGLATADDIRRWSKGEVKKPETINYRTLKPEKDGLFCERIFGPTRDWEC
ACGKYKRVRYKGIICERCGVEVTKSKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLERIIYFAANIITSVDEEARHNDLSTLEADMLLEKKDVEAEAESDIAERAAKLEED
LAELEAAGAKADARRKVQTAADKEMQHIRERAEREIDRLDEIWQTFVKLDTKQMIIDETV
YEELIDRYEDYFTGGMGAEAIQTLIRNFDLEAESEELHTIINEGKGQKKMRALKRLKVVA
AFLRSGNDPAGMVLDCIPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRMIDL
GAPEIIVNNEKRMLQESVDALFDNGRRGRPVTGPGNRPLKSLSDLLKGKQGRFRQNLLGK
RVDYSGRSVIIVGPQLKLHECGLPKLMALELFKPFVMKRLVENDYAQNIKSAKRMVERQR
PEVWDVLEEAISEHPVMLNRAPTLHRLGIQAFEPKLVEGKAIQLHPLACEAFNADFDGDQ
MAVHLPLSAEAQAEARILMLASNNILSPASGKPLAMPRLDMVTGLYFLTMNKREDEIGGQ
GAYRPAGENGPATGDYSSFAEAIMARDRGVLGLQAPIRVRISHLRPPADIEAEQFPDGWE
QGQIWTAHTTLGRVMFNELLPWNYPYLEGVMVRKGGGTGFIMLGDVINDLAAKYPMITVA
QTMDKMKDAGFYWSTRSGVTIAMSDVLVLPNKEEILETYEAEAREIEHKFWVKGALRERD
RYDRLVELWQDATNKVGKAVEDLYPDDNPIPMIVKSGAAGNMRQIWTLAGMKGMVVNSKG
DYITRPIKTSFREGLSVLEYFNNSHGSRKGLADTALRTADSGYLTRRLVDVAQDVIVRED
DCGTRQGVRVPVAVEAKDADGNVSGYSRHSLVETSVSGRVLATEVNGADGEVLFEAGADL
TETTIDELVARGVTEVKVRSVLTCQTPTGVCAKCYGKSMASGQLVDIGEAVGIVAAQSIG
EPGTQLTMRTFHQGGVGGDITGGLPRVQELFEARVPKNASPIAEFSGTVALEDDGNFYKL
TLTSDDGNEEEIYEKLSKRQGLAQVKVPMDDNPSVFIERTLRDGDHVELGERLLRGPADP
HDVLRVLRRRGVEKHLIDEVQAVYRTQGVAIHDKHIEIIIRQMLRRGTVINAGSTDFLPG
TLVDLTEARRINAAIRAEGGQPAELRDQIMGITKASLATESWLSAASFQETTRVLTDAAI
NKRSDQLIGLKENVIIGKLIPAGTGISRYRNIEVKPTEAARNAAYSIPTYGDSIYGDDGY
AEFTGASVPLDEEFQL
NT seq
4011 nt
NT seq
+upstream
nt +downstream
nt
gtgttcgacgtaaacctcttcgaagagctccgcatcggcctggctaccgccgacgacatc
cgccgttggtccaagggcgaggtcaaaaagccggagaccatcaactaccgcaccctcaag
ccggagaaggacggtctcttctgcgagcgcatcttcggcccgacccgtgactgggagtgc
gcctgcggcaagtacaagcgagtgcgttacaagggcatcatctgcgagcgctgcggcgtc
gaggtgaccaagtccaaggtgcgccgcgagcgcatgggacacatcgagctggccgcgccg
gtcacccacatctggtacttcaagggtgtccccagccgtctcggctacctgctcgacctc
gcgccgaaggatctcgagcggatcatctacttcgccgcgaacatcatcacgtccgtcgac
gaggaggcgcgtcacaacgacctgtccaccctcgaggcagacatgctcctggagaagaag
gacgtcgaggccgaggccgagtccgacatcgccgagcgcgcagccaagctggaggaggac
ctcgccgagctcgaggccgccggcgccaaggccgacgcacgccgcaaggtgcagaccgcc
gcagacaaggagatgcagcacatccgcgagcgcgcggagcgtgagatcgaccgtctcgac
gagatctggcagaccttcgtcaagctcgacaccaagcagatgatcatcgacgagaccgtc
tatgaagagctcatcgaccgctacgaggactacttcaccggcggcatgggcgctgaggcc
atccagaccctcatccgcaacttcgacctcgaggcagagtccgaagagctgcacaccatc
atcaacgagggcaagggccagaagaagatgcgcgccctcaagcgcctcaaggtcgtcgcc
gcgttcctgcgttccggcaacgacccggccggcatggtcctcgactgcatcccggtgatc
ccgccggagctgcgcccgatggtccagctcgacggcggccgtttcgccacctcggacctg
aacgacctgtaccgccgcgtgatcaaccgcaacaaccgcctcaagcgcatgatcgacctc
ggcgcgcccgagatcatcgtgaacaacgagaagcggatgctgcaggagtccgtcgacgca
ctgttcgacaacggccgtcgaggccgtccggtcaccgggccgggcaaccgcccgctgaag
tccctgtccgacctgctcaagggcaagcagggccgcttccgccagaacctgctgggcaag
cgcgtcgactactccggccgttccgtcatcatcgtcggcccgcagctcaagctccacgag
tgcggtctgccgaagctgatggcactggagctgttcaagcctttcgtgatgaagcgtctg
gtggagaacgactacgcgcagaacatcaagtccgccaagcggatggtcgagcgccagcgc
cccgaggtctgggacgtgctggaggaggccatctccgagcacccggtgatgctcaaccgt
gcgccgaccctgcaccgtctgggcatccaggcgttcgagccgaagctcgtcgagggcaag
gccatccagctgcacccgctggcgtgcgaggccttcaacgccgacttcgacggcgaccag
atggcagtccacctgccgctgtccgccgaggcgcaggccgaggcccgcatcctcatgctc
gcctcgaacaacatcctgtccccggcgtcgggcaagccgctggctatgccgcgtctggac
atggtcaccggcctgtacttcctcacgatgaacaagcgcgaggatgagatcggcggccag
ggcgcctaccgtccggccggcgagaacggtccggcgacgggcgactactcgtccttcgcc
gaggccatcatggcccgggaccgtggtgtcctgggtctgcaggcgccgatccgcgtgcgg
atctcgcacctgcgccccccggccgacatcgaggcggagcagttccccgacgggtgggag
cagggccagatctggaccgcgcacaccaccctgggccgcgtcatgttcaacgagctgctg
ccgtggaactacccgtacctcgagggcgtcatggtccgtaagggcggcggcacgggcttc
atcatgctcggcgacgtcatcaacgacctcgccgcgaagtacccgatgatcaccgtcgct
cagacgatggacaagatgaaggacgccggcttctactggtcgacccgttccggcgtcacc
atcgccatgtccgacgttctggtcctcccgaacaaggaggagatcctcgagacctacgag
gccgaggcccgcgagatcgagcacaagttctgggtcaagggcgcgctgcgcgagcgcgac
cgttacgaccgtctcgtcgagctctggcaggacgccaccaacaaggtgggtaaggccgtc
gaggacctgtacccggacgacaacccgattccgatgatcgtgaagtcgggcgccgccggc
aacatgcgccagatctggaccctggcaggcatgaagggcatggttgtgaactcgaagggt
gactacatcacccgtccgatcaagacctccttccgggagggcctgtcggttctcgagtac
ttcaacaactcgcacggttcccgtaagggcctggccgacaccgccctgcgcaccgccgac
tccggctacctgacccgtcgactcgtcgacgtggcccaggacgtcatcgtccgcgaggac
gactgcggcacccgccagggtgtccgcgtgccggtggcagtggaggccaaggacgcagac
ggcaacgtcagcggatactcccgccactcgctggtggagacctccgtgtccggccgtgtg
ctggccaccgaggtcaacggtgccgacggcgaggtcctcttcgaggccggcgccgacctc
accgagaccaccatcgacgagctcgtcgcacgcggcgtcaccgaggtcaaggtccgctcc
gtgctgacctgccagaccccgaccggcgtctgcgccaagtgctacggcaagtccatggcc
tccggccagctggtcgacatcggtgaggcggtcggcatcgtcgccgcccagtccatcggt
gagccgggcacccagctgaccatgcgtaccttccaccagggtggcgtcggcggcgacatc
accggcggtctgccgcgtgtccaggagctgttcgaggcacgtgtgccgaagaacgcctcc
ccgatcgcggagttctcgggcaccgtcgcgctggaggacgacggcaacttctacaagttg
acgctgacctccgacgacggcaacgaggaggagatctacgagaagctgtccaagcggcag
ggtctcgcccaggtcaaggtcccgatggacgacaacccgtcggtcttcatcgagcgcacc
ctgcgcgacggcgaccacgtggagctcggcgagcgcctgctccgcggccccgccgacccg
cacgacgtgctccgtgtgctgcgccgacgcggcgtcgagaagcacctcatcgacgaggtg
caggccgtctaccgcacccagggtgtggcgatccacgacaagcacatcgagatcatcatc
cgccagatgctgcgccgcggcaccgtcatcaacgccggttccacggacttcctgccgggc
accctggtcgacctcaccgaggcacgccgcatcaacgcggcgatccgcgccgagggcggc
cagccggcggagctgcgcgaccagatcatgggcatcaccaaggcctccctggccacggag
tcctggctctcggccgcctccttccaggagacgacccgggtgctcacggacgcggcgatc
aacaagcgctccgaccagctcatcggtctcaaggagaacgtgatcatcggtaagctgatc
ccggccggcaccggtatctcccggtaccgcaacatcgaggtcaagccgaccgaggcggcc
cgtaacgcggcctactcgatcccgacctacggcgactccatctacggcgacgacggctac
gccgagttcaccggcgcatccgtgccgctggacgaggagttccagctctag
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