Corynebacterium marinum: B840_03320
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Entry
B840_03320 CDS
T03633
Symbol
uvrD1
Name
(GenBank) ATP-dependent DNA helicase UvrD1
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cmq
Corynebacterium marinum
Pathway
cmq03420
Nucleotide excision repair
cmq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cmq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
B840_03320 (uvrD1)
03430 Mismatch repair
B840_03320 (uvrD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmq03400
]
B840_03320 (uvrD1)
Enzymes [BR:
cmq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
B840_03320 (uvrD1)
DNA repair and recombination proteins [BR:
cmq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
B840_03320 (uvrD1)
MMR (mismatch excision repair)
Other MMR factors
B840_03320 (uvrD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
ResIII
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AJK68286
UniProt:
A0A0B6TU78
LinkDB
All DBs
Position
674744..677128
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AA seq
794 aa
AA seq
DB search
MNSPFTQSSTDLTLGLNEQQKAAVEHEGSPLLIVAGAGSGKTAVLTRRIAHLMRHRGVAP
WQILAITFTNKAAAEMRERVAGLVGPVAERMWVATFHSVCVRILRQQAQLVPGLNTNFTI
YDSDDSRRLLSMIAKDHNLDLKKFTARVLASAISNLKNELVSPQEALADAEATRNPFELT
VAQVFRDYQRRLRSSNAVDFDDLIGEVVRIFQEHPQVTDHYRRRFRHVLIDEYQDTNHAQ
YMLISTLVGKGPDAPELCVVGDSDQSIYAFRGATIRNIEEFERDYPQARTILLEQNYRST
QTILNAANSVISRNDGRREKKLWTALGEGQQIIGYVADNEHDEARFIAGEIDAVVDKGAS
YSDVAVMYRTNNASRALEDVFIRAGIPYKVVGGTRFYERREIRDIVAYLRILDNPDDTVS
LRRIINTPRRGIGDRAQAFIALHAQNNAVSFGAALLDAGADKIPLLGARGRNAVVKFVEM
MDTVRAEMPSMVNEATGMPDLGEVISRVLDITGYRAELEASNDPQDGARLDNLNELVSVA
REFSSEAANQVAYAEMDGGEFEPEEGDPQPGSLQAFLEKVSLVADADQLPDNEHGVVTLM
TLHTAKGLEFPVVFLTGWEDGQFPHLRSLGDPKELAEERRLAYVGITRARRQLYVTRAML
RSSWGNAVTNPPSRFLGEIPEDLIDWRREEPEQSWSDSWGGGSGGGSWSGSWSGSRGQST
TGRAVPKKPALPKARSSNSNLQLAVGDRVNHDKYGLGTVIASDGSGARATVTIDFGSSGK
VRLMLIGGVPMEKL
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgaattcgccgtttacccagtcgtccactgacctcaccctcggcctcaatgagcagcag
aaggccgccgtcgagcacgagggctcccccctgctcatcgtcgcgggcgccggttccggc
aagaccgcggtgctcacccgtcgtatcgcgcacctcatgcgccaccgcggggtcgctccc
tggcagatcctggccatcacgttcaccaacaaggccgccgcggagatgcgcgagcgcgtc
gcgggcctggtggggccggtggcggaacggatgtgggtggccacgttccactccgtctgc
gtgcggatcctgcggcagcaggcgcagctcgtgccgggactgaacaccaacttcaccatc
tacgactcggatgattcgcgtcggttgctcagcatgatcgccaaggaccacaacctggac
ctgaagaagttcaccgcgcgggtgcttgcctccgcgatctcgaacctgaagaacgagctc
gtcagtccgcaggaggcgttggccgacgcggaggccacccgcaaccccttcgaactgacc
gtggcgcaggtgttcagggactaccagcggcgcctgcgctcctccaacgctgtggacttc
gacgacctcatcggggaggtggtccgcatattccaggagcacccgcaggtgacggaccac
taccgccgacgtttccgccacgtgctcatcgacgagtaccaggacaccaaccacgcccag
tacatgctcatctccacgctggtgggcaaggggccggacgcccccgagctgtgcgtggtg
ggcgactccgaccagtcgatctacgccttccgcggcgcgacgatccgcaacatcgaggag
ttcgagcgggactacccgcaggcccggacgatcctgctggagcagaactaccgctcgacc
cagacgatcctcaatgcggccaactcggtgatctcgcgcaacgacggccgccgggagaag
aagctgtggactgcgctcggggagggccagcagatcatcggctacgtggcggacaacgag
cacgatgaggcgcggttcatcgccggagagatagacgcggtcgtcgacaagggcgccagc
tactctgatgtcgccgtgatgtaccggacgaacaacgcgtcgcgcgcgctggaggacgtg
ttcatccgggcgggcatcccgtacaaggtggtcggcggcacccgcttctacgagcgccgc
gagatccgcgacatcgtcgcctacctgcgcatcctggacaacccggacgacacggtgagc
ctgcggcgcatcatcaataccccgcgccgggggatcggcgaccgggcgcaggcgttcatc
gcgctgcacgcgcagaacaacgcggtgtccttcggtgccgcgcttctcgacgccggggcg
gacaagattcccctcctgggtgcccgcggacgcaacgccgtggtgaagttcgtcgagatg
atggacaccgtgcgtgcggagatgccgtcgatggtcaacgaggccaccggcatgcctgac
ctgggggaagtcatttcccgggtgctcgacatcaccggttaccgcgccgagctggaggcc
agcaacgacccgcaggacggggcgcgcctggacaacctcaacgagctggtgtcggtggcc
cgcgaattctcctcggaagcggcgaaccaggttgcctacgcggagatggacggcggggag
ttcgagccggaggagggcgacccccagccggggtcgctgcaggcgttcctggagaaagtc
tcgctcgtggcggacgcggaccagctccccgacaacgagcacggcgtggttaccctgatg
accctgcacacagcgaagggcctggagttcccggtggtgttcctcaccgggtgggaggac
ggtcagttcccccacctgcgttcgctgggagatcccaaggagctggcggaggaacggcgg
ctcgcctacgtgggcatcacgcgcgcgcggcgccagctctacgtcacccgggcgatgctg
cgttcctcgtggggcaacgcggtgaccaacccgccgagccgcttcctcggggagatcccg
gaggacctgatcgactggcggcgcgaggaaccggagcagtcctggtccgattcctggggc
ggcggcagcgggggcggatcctggtcggggtcgtggtccggatcccggggccagtcgacc
acgggccgggcggtgccgaagaaaccggcgctgcccaaggcacggagctccaacagcaac
ctgcagctggcggtgggggaccgggtcaaccacgacaaatatggactgggcaccgtcatc
gcctccgacggctccggcgcccgggcgaccgtcaccatcgacttcggttcctccggaaag
gtgcgcctcatgctcatcggcggggtgccgatggagaagctttag
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