Corynebacterium marinum: B840_08225
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Entry
B840_08225 CDS
T03633
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
cmq
Corynebacterium marinum
Pathway
cmq03030
DNA replication
cmq03430
Mismatch repair
cmq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cmq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
B840_08225 (dnaE)
03430 Mismatch repair
B840_08225 (dnaE)
03440 Homologous recombination
B840_08225 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cmq03032
]
B840_08225 (dnaE)
03400 DNA repair and recombination proteins [BR:
cmq03400
]
B840_08225 (dnaE)
Enzymes [BR:
cmq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
B840_08225 (dnaE)
DNA replication proteins [BR:
cmq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
B840_08225 (dnaE)
DNA repair and recombination proteins [BR:
cmq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
B840_08225 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
Motif
Other DBs
NCBI-ProteinID:
AJK69243
UniProt:
A0A0B6TMT8
LinkDB
All DBs
Position
complement(1699275..1702841)
Genome browser
AA seq
1188 aa
AA seq
DB search
MAKNSSFVHLHNHTEFSMLDGMAKIDMLAEEVNRQGMPAVGITDHGNMFGSDAFYRAMTD
AKVKPIIGIEAYLAPESRFNKNRVRWGEPHQKSDDVSASGAYLHQTMVAENATGLRNLFY
LSSMASYEGQLGKWPRMDAELIAEHADGIIATTGCPSGDVQTRLRLGQFDQALEAAAMWQ
DIYGRDNYFLELMDHGLHIEQRVRRELLEIGKKLDLPPLVTNDCHYVLESQAQAHEAMLC
VQTGKTLSDPDRFKFDGSGYYIKSAAEMRSIFDDVVPDGCDNTLWIAERVQDYGEIWESH
PHDRMPVADVPEGYTPTTWLHHEVIEGLKERFDGREVPQEYIDRANYEIEVIDMKGYPSY
FLIVAEIIKHARSIGIWVGPGRGSAAGALVAYALTITNIDPIEHGLLFERFLNPERPSAP
DIDIDFDDRRRGEMIRYAAERWGEDKIAQVITFGTVKTKQALKDSARVQFGQAGYQMADR
ITKVLPPAIMAKDIPLSGITDPAHERFNEAGEVRNLIETDADIRKIYETARGLEGVVRQA
GVHACAVIMASVPLLNHIPMWKRPADGALITGWDYPACENIGLLKMDFLGLRNLTVIGDA
LENIRKNRGEELDLESLAVEDKATYELLGRGDTLGVFQLDGGGMQELLKRMQPTGFNDIV
ASLALYRPGPMGVNAHWDYADRKNGRKPIEPIHPELEEPLAEILSETYGLIVYQEQIMRI
SQKVANYTAGEADGFRKAMGKKKPEVLEKEYAKFEAGMQSNGFGVEAIKALWDTILPFAS
YAFNKSHAAGYGLVSFWTAYLKAHYAPEYMAALLTSVSDKKDKSAIYLSDCRHLGLKVLS
PDINESENDFLAVGEDIRFGLGAIRNVGHEVVDSIVETRKAKGRFSSFSDYLEKIDLLPC
NKRITESLIKGGAFDSLDHSRKGLMLIHEDAVDSVLATKKAADKGQFDLFAAFGGDDGAD
AGPSVFAIEVPEDAWERKHELALEREMLGLYVSGHPLDGFEEALEAQTDTPLTTILGGEM
RHGAEVTIGGIISGVDRRFSKKDGSPWAIVTVEDHNGAQVELLVFNKIYALVASQIVEDN
IILAKAHISIRDDRMSLFCDDLKVPELGPGNGAGLPLRLIMRTDQCTMDNIKRLKDVLVA
NEGDSDVYLKLINGEESTMMVLGDHLRVNRTGSLMGDLKATMGPGILG
NT seq
3567 nt
NT seq
+upstream
nt +downstream
nt
atggccaagaactcctcctttgtacatctgcacaaccacaccgagttctcgatgctcgac
ggcatggcgaagatcgacatgctcgcggaggaggtcaaccggcaggggatgccggcggtc
ggcatcaccgaccacggcaacatgttcggctcggacgcgttctaccgggcgatgacggac
gcgaaagtgaagccgatcatcggcatcgaggcgtacctcgcgccggagagccgcttcaac
aagaaccgggtgcgctggggcgagccgcaccagaagtcggacgacgtgtccgcctcgggc
gcctacctgcaccagacgatggtcgcggagaacgccaccgggctgaggaacctcttctac
ctctcgtcgatggcctcgtacgaggggcagctgggaaagtggccgcgcatggacgcggaa
ctcatcgccgagcacgccgacggcatcatcgccaccaccggctgcccctcaggcgacgtg
cagacccgtctgcgcctgggccagttcgaccaggcgctcgaggccgccgccatgtggcag
gacatctacggccgcgacaactacttcctcgagctcatggaccacggcctgcacatcgaa
cagcgggtgcgccgcgagctgctggagatcggcaagaagctcgatctgccgccgctggtc
accaacgactgccactatgtcctcgagtcccaggcgcaggcgcacgaggcgatgctgtgc
gtgcagaccggcaagacgctcagcgaccccgaccgcttcaagttcgacggctccggctac
tacatcaagtccgccgccgagatgcgctccattttcgacgacgtcgtgcccgacggctgc
gacaacaccctgtggattgccgagcgcgtgcaggactacggcgagatctgggagtcccac
ccgcacgaccgcatgcccgtcgccgacgtgcccgagggttataccccgaccacgtggctc
caccacgaggtcatagaggggctgaaggagcgtttcgacggccgcgaggtcccccaggag
tacatcgaccgcgcgaactacgagatcgaggtcatcgacatgaaggggtacccgtcgtac
ttcctcatcgtcgcggagatcatcaagcacgcccgctccatcgggatctgggtcggcccg
ggccgtggttcggcggccggcgcgctggtcgcctacgcgctgacgatcaccaacatcgac
ccgatcgagcacggcctgctgttcgagcgcttcctcaaccccgagcggccgtcggcaccc
gatatcgacatcgacttcgacgaccgccggcgcggcgagatgatccgctacgccgccgag
cgctggggcgaggacaagatcgcccaggtgatcaccttcggcacagtgaagacgaagcag
gcgctcaaggattccgcccgcgtgcagttcggccaggccggctaccagatggcggaccgc
atcaccaaggtcctgccgccggcgatcatggccaaggacatcccgctgtccggcatcacc
gaccccgcccacgagcgtttcaacgaggccggcgaggtccgcaacctcatcgagaccgac
gcggacatccgcaagatctacgagaccgcccggggccttgagggcgtcgtcaggcaggcg
ggcgtccacgcctgcgcggtgatcatggcgagcgttccgctgctcaaccacatccccatg
tggaagcggccggccgacggcgcgctcatcaccggctgggactacccggcctgcgagaac
atcggcctgctgaagatggacttcctgggcctgcgcaacctcaccgtcatcggcgacgca
ctggagaacatccggaagaaccggggcgaggaactcgacctggagtccctcgcggtggag
gacaaggccacctacgaactgctgggcaggggagacaccctcggcgtgttccagctcgac
ggcggcggcatgcaggagctgctcaagcgcatgcagccgaccggcttcaacgacatcgtc
gcctcgctggcgctctaccggccgggcccgatgggcgtgaacgcccactgggactacgcg
gaccgcaagaacgggcgcaagcccatcgagccgatccacccggagctggaggaaccgttg
gcggagatcctcagcgagacctacggcctgatcgtctaccaggagcagatcatgaggatc
tcgcagaaggtggccaactacaccgccggcgaggccgacggtttccgtaaggcgatgggc
aagaagaagccggaggtgctggagaaggagtacgccaagttcgaggccggcatgcagtcc
aacggtttcggcgtcgaggcgatcaaggccctgtgggacacgatcctgcccttcgcctcc
tacgcgttcaacaagtcgcacgccgcaggctacgggctggtgtccttctggacggcctac
ctcaaggcccactacgcacccgagtacatggcggcactgctgacgtccgtgtccgacaag
aaggacaagtcggcgatctacctctccgactgccgtcacctcggcctcaaggtgctctcc
ccggacatcaacgaatccgagaacgacttcctcgccgtcggcgaggacatccgtttcggg
ctcggagccatccggaacgtcggccatgaagtggtcgattcgatcgtcgagacgcggaag
gcgaagggccgcttctccagcttctccgactacctggagaagatcgacctcctgccctgc
aacaaacgcatcaccgaatccctcatcaagggcggcgccttcgactcgctcgaccactca
cgcaagggcctcatgctcatccacgaggacgccgtcgattcggtgctcgcgaccaagaag
gccgccgacaaggggcagttcgacctcttcgccgcattcggcggcgacgacggcgccgac
gccggccccagcgtcttcgccatcgaggtccccgaggacgcgtgggagcgcaaacacgag
ctggccctggagcgcgagatgctcggcctctacgtctccgggcacccgctcgacggtttc
gaggaggccctcgaggcccagaccgacaccccgctgaccaccatcctgggcggggagatg
cgccacggcgcggaggtcaccatcggcggcatcatctcgggcgtcgacaggcgcttctcc
aagaaggacggctcaccgtgggcgatcgtcaccgtggaggaccacaacggcgcgcaggtc
gaactgctggtgttcaacaagatctacgcgctggtggcctcccagatcgtcgaggacaac
atcatcctggccaaggcgcacatctccatccgcgacgaccgcatgtccctgttctgcgac
gacctcaaggtccccgaactcggccccggcaacggcgccgggctgccgctccggctgatc
atgcggaccgaccagtgcaccatggacaacatcaagcggctcaaggatgtgctggtggcc
aacgagggggattccgacgtctacctcaaactcatcaacggcgaggagtccaccatgatg
gtgctcggcgaccacctgcgggtcaaccgcaccggctccctcatgggcgacctcaaggcg
acgatggggccggggatcctggggtag
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