Cyclobacterium marinum: Cycma_0344
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Entry
Cycma_0344 CDS
T01592
Name
(GenBank) UvrD/REP helicase
Organism
cmr
Cyclobacterium marinum
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
L_protein_N
AAA_12
YflT
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
AEL24124
UniProt:
G0IUC9
LinkDB
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Position
complement(370420..373632)
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AA seq
1070 aa
AA seq
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MITEAPLQIYKSSAGSGKTYTLTTAYLKLALESPTAFTRILAVTFTNKATQEMKDRIIKE
LKRLKSGVDPNETMHRELLEKWQLSPKELSERATQVLTTILHDFGSFSVSTIDSFFQKVI
RAFAREIDLQAKFDVELDLDGVMTRMVDRLMLRVAEDPELHRWMVEFSISKVTEGKSWDV
RKSIEDLGKKIFLEDFKIVQKEVGVFLENPHTFKAFKEFIFGQKQVIIDKATELKTTAQA
IRDNNGLSWEDFSGGTRSFSKNFDQLGKKEDPIPLLTDAQEKFLLGPEKWYTKTSKCKAA
IESAYAEGLSEILHQFKPLKRSWNTLDAIAKNLYTFGLFGYLLRELKELKEEENLLLISE
TNDFLKSITSDNDTPFIYEKVGNRYQHFLLDEFQDTSGFQWASFRPLLLNTLSMGKTNLV
VGDVKQSIYRWRGGEMRLLMNQVEKDLGGFGIDVKKLDTNFRSLPNIVAFNNTLFSKLSK
LLSDHLKTVLDDASMDRIEQAYGDVLQKIAPGQKAKGVEGKVIVSFIETDKETKYNDEIL
KILPEKVEELLDQGYQLKDIAILVRKNDQAASIADAFMSYAEKNKDNGYRYDVLSDEALF
LHKASVVKCLLAALEIVNDAEDSLAEKTFWIQLARIRDIPFNHVLFRKDSLPEEFKGIRE
RFFQQLSIFRKLPLMDLVEAIIDLADLNDGAGELAYLSGFKEAVYDFIGKNRADLGGFLN
WWEQKGNKRTVKIPEEFDAIRIQTIHKSKGLQYKVVLLPYLDWKLFDTGKENIIWTKYDW
DETLPPAIVPLSVRSQLKDSAFSTAYLEENLMNHLDSLNMLYVGFTRAEEVLVAMAPYKD
SKNKDNLTTVADLLREVMKFRAPENDLLDFEKYYNNEEKKFELGVWHQNESNEKALPPPQ
PMVWKYRPWEKSLEVKQAFGEFETSEIVSKRAYGVLVHRIIEKSRTKKDFFLELQSMFFD
GVITEEERELLEGQFNSLCQIEVFNSWFDGSGQVLTEQGIFLPGGEHKRPDRIIYYKKEI
AVIDFKTGEKRTSHASQVSEYVKLVKDIEKGMPVQGYICYIESSTIEKVL
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atgattacagaagctcctttacaaatttataaatcttccgcaggttccggaaaaacctat
accctcacaaccgcttatttgaaattggctcttgaatctccgactgcttttactcggatt
ttggcggttacctttaccaataaggctactcaagaaatgaaggacaggattattaaagag
ctaaaaagacttaagagtggggtggatccgaatgaaaccatgcacagagaactcttggag
aaatggcaattgtctcctaaggaattgtccgaaagggcgacacaagtgttgaccacaatt
cttcatgattttggatctttttcggtgagtacaattgatagtttttttcaaaaggttatc
cgagcattcgctagggaaatcgatttacaagctaaatttgatgtcgagttagacctggat
ggggtcatgactcgaatggtagatagactaatgttacgggtagcagaagacccggagtta
cacaggtggatggttgagttttctatcagcaaggtgacagaaggaaaatcctgggacgtt
agaaaatctattgaggacttaggaaaaaaaatatttttagaagactttaaaattgtccaa
aaagaagtgggagtctttttggagaatccccatacttttaaagcgtttaaggaatttata
tttgggcagaaacaggtcattattgataaggctacagaacttaagactacagctcaggcc
atccgagataacaatgggctttcttgggaagatttttccggtgggactaggtctttcagt
aaaaattttgatcaattagggaaaaaggaagatccgattcctctgcttacagatgcccaa
gaaaagtttctccttgggccggaaaagtggtacaccaaaacaagtaaatgtaaagctgct
attgagtctgcctatgcagaaggtttaagtgaaattttgcatcagtttaaacctcttaaa
aggagctggaataccttagatgcgatagctaaaaatttgtacacttttggtttatttggc
tatttgttaagggaactgaaggaattgaaagaggaagagaatttgctattgatctcagaa
acaaatgattttctaaaatccattacaagtgacaatgacactccattcatctatgaaaaa
gtaggcaatcgataccaacattttttactggatgaatttcaggatacttcaggttttcaa
tgggcaagttttcgtccgctattgctaaatactctttctatgggtaaaacaaatttggtg
gtcggtgatgttaagcaatccatttaccgctggagaggaggggaaatgcggctactcatg
aatcaagtcgagaaagaccttggaggttttgggatagatgttaaaaagttggataccaac
tttagaagtttgcctaatattgtagcctttaacaatacattgttttcaaaattgtcaaag
ttgctaagtgatcatttaaaaacggtcttagatgacgcatcaatggacagaattgagcaa
gcctatggtgatgttttgcagaaaattgctcccgggcaaaaagccaaaggagtggaagga
aaggtaatcgtgtcatttattgaaactgataaggaaacgaaatacaatgatgaaatcctg
aaaatattaccggagaaggttgaggaattattagatcaaggctaccaattgaaagatata
gccattttggtgcggaaaaatgatcaagctgcttcaatcgcagatgcctttatgtcctat
gcggaaaaaaataaagataatggttatagatatgatgtgctttctgatgaagccttattc
cttcacaaggcatctgttgtcaaatgcctattggcggccttagaaattgtaaatgatgca
gaagattcgctggctgaaaaaactttttggatacaattggcaagaataagagatatccct
tttaatcatgtattgtttagaaaagatagtttaccagaagaatttaaagggataagagaa
agatttttccaacagttatccatcttcaggaagttgccactaatggacttggtagaagca
attatcgatttggcagatttgaatgatggagctggtgaactagcatatttgtcaggcttt
aaagaagctgtatatgattttatcggtaaaaacagggctgatttgggaggcttccttaat
tggtgggagcaaaaaggaaataaaagaacggtgaaaattcctgaagagtttgatgcaatt
cgaattcaaaccattcataaatctaagggtttgcaatataaggttgtgctattaccttac
ctggattggaaattgtttgataccggaaaagaaaacattatttggaccaagtacgattgg
gatgagactttacctccggcgattgtgcctttgtccgtgagatctcaattaaaagattct
gcattttcaactgcctatttagaagagaacctaatgaatcatcttgattctttaaatatg
ctttatgtgggcttcaccagagcagaagaagtgcttgtggcaatggctccttataaagat
tccaaaaacaaggataatttaactacagtggctgacttactacgtgaagtgatgaaattt
agagccccggagaatgatttgttggattttgaaaagtattataataatgaggaaaagaaa
tttgaattaggagtctggcaccaaaacgaatccaatgaaaaggccttacccccacctcag
cccatggtatggaagtatagaccctgggaaaaatctctggaagtcaagcaggcattcgga
gaatttgaaacttcagaaattgtatctaaaagagcttacggggtactggtacaccggatt
attgaaaaatcaaggaccaaaaaggacttttttctggaattacaaagtatgttctttgat
ggtgtaattactgaagaggagagagaattgttggaaggccagttcaatagcctttgccaa
atagaagtttttaattcttggtttgatggttcaggacaggtacttacagagcaaggtata
tttcttcctggaggagagcacaaacggccggatagaattatttattataagaaagagata
gcagttatagatttcaaaaccggagaaaagagaacttctcatgcttcacaggtttcggag
tatgtcaagctggtaaaagacattgaaaaggggatgccagtacaaggatatatttgttac
atagaaagtagcaccattgaaaaagttttataa
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