Cyclobacterium marinum: Cycma_0537
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Entry
Cycma_0537 CDS
T01592
Name
(GenBank) Ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
cmr
Cyclobacterium marinum
Brite
KEGG Orthology (KO) [BR:
cmr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
Cycma_0537
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmr03019
]
Cycma_0537
03009 Ribosome biogenesis [BR:
cmr03009
]
Cycma_0537
03036 Chromosome and associated proteins [BR:
cmr03036
]
Cycma_0537
Enzymes [BR:
cmr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
Cycma_0537
Messenger RNA biogenesis [BR:
cmr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Cycma_0537
Ribosome biogenesis [BR:
cmr03009
]
Eukaryotic type
90S particles
RNase
Cycma_0537
Prokaryotic type
rRNA processing factors
Cycma_0537
Chromosome and associated proteins [BR:
cmr03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
Cycma_0537
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DSRM_2
Motif
Other DBs
NCBI-ProteinID:
AEL24312
UniProt:
G0IXX9
LinkDB
All DBs
Position
614975..615718
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AA seq
247 aa
AA seq
DB search
MKLLRLLRIQELTYNKKDKRLAYAIKNIVGSKPLNLSLYRLAFRHVSASKEIKAGVKISN
ERLEYLGDAVLGTIVAEFLFQKFPYRDEGFLTETRSRIVNRESLNQVGQKIGLPKIVESE
MGNKVPYSFKSLYGDTLEALIGAIYLDRGYYFCRKFINSRLINPFFDLDNIIATTTNFKS
KIIEWSQKDNKEIDFKLKSVEGSQRFKEFKVELNINGTPFSEGKGATKKKAEQEAARIAC
EKLQIIP
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
ttgaaattacttcggttgctcagaattcaagagctaacttataataagaaagataaaagg
cttgcttacgctattaaaaacatagtgggtagcaagcctttaaatttatctctctataga
cttgcgttcagacatgtttctgcatcgaaagaaattaaagccggtgtaaaaattagtaat
gagcgccttgaatacctgggagatgcagtattgggcaccattgtggccgaattcctcttc
caaaaattcccctatcgtgacgaaggttttcttaccgaaacaagatctagaattgtcaac
agagaatccctgaaccaagtgggtcaaaaaatcggattgcctaaaattgtggaatccgaa
atgggcaacaaagtaccctatagtttcaaatctctttatggagatacgctggaagccctg
atcggtgccatttatttagaccgaggatactatttttgcagaaagttcatcaacagtagg
ttaatcaatcctttttttgacttggacaatatcattgccactacaaccaattttaaaagc
aaaattatagagtggtctcaaaaagacaataaagaaatagactttaaactaaaatctgta
gaaggcagccaacgtttcaaggagtttaaagtagaattgaacatcaatggtacacctttc
tcagaagggaaaggggctaccaagaaaaaagctgaacaggaagctgcaagaatagcctgc
gaaaaactacagataatcccctaa
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