Cyclobacterium marinum: Cycma_0796
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Entry
Cycma_0796 CDS
T01592
Name
(GenBank) ABC transporter related protein
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
cmr
Cyclobacterium marinum
Pathway
cmr02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cmr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Cycma_0796
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cmr02000
]
Cycma_0796
Enzymes [BR:
cmr01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
Cycma_0796
Transporters [BR:
cmr02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
Cycma_0796
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
AAA
AAA_29
RsgA_GTPase
SbcC_Walker_B
AAA_16
nSTAND3
ABC_ATPase
DEAD
OAR
AAA_18
AAA_25
AAA_24
Motif
Other DBs
NCBI-ProteinID:
AEL24570
UniProt:
G0J261
LinkDB
All DBs
Position
complement(934820..936652)
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AA seq
610 aa
AA seq
DB search
MKTYLRILAYARPYRRYLPVYIAYALLAIVFGLLNFTLLKPLFDVIFEQVGKEELQVYAN
KPEFSLSVNYFMHLFNYYFLQIANMYGRFGTLVYVCIIIVISVFLSNLFAYLSGVVLAKV
RADIIQGMRVHIFTSVSNMHLGYFSDERKGDLISKMTNDIQEVENSIVQSLRVIFKEPVT
VILYFAVLFFMSYQLTLFTILLIPVSGAIIGYITKKLKKKAEQSQESLGRIVNILDETIG
GMRVVKAFGARSFVQNKFEAETDYYARVNVSMARKNELASPVSQFLGVSVVAGILLYGGN
LVLNNTSALSASEFIAYIILFTQVLNPAKEISRALSSIQRGLASARRIFAVVDTKPRIEN
VVSPQALKGFSQAVVFKNVGFAYQENAVLNGVNFKLEKGRTIALVGPSGGGKSTLADLLP
RFYDPSQGEITIDGIDLRNCSIADLRGLMGIVTQESILFNDTVFNNIAFGMEGVSLERVQ
EAAKIANAHEFIMELEQGYETNIGERGGKLSGGQRQRISIARAVLKNPEILILDEATSAL
DSASEKLVQEALSNLMKNRTSLVIAHRLSTIQHADEILVIEGGSIVERGTHDELIQKGGL
YNKLSQMQSV
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacttacttaagaatcttggcctatgcgcgaccttaccgaaggtatttgcctgtg
tatattgcctatgcgttattggctatagtttttggtttgctaaatttcacccttttaaaa
ccactttttgatgtgatatttgaacaagtggggaaagaggaattacaagtgtatgccaac
aaacctgaattctctttaagtgttaattattttatgcatttattcaactactatttcctg
caaattgccaatatgtatgggaggtttgggactttggtatatgtgtgtataattattgtg
atatcggtgtttttaagcaatttatttgcctatttgtcaggagtagttttggccaaagtg
cgggctgatattattcaaggaatgcgtgtccatattttcacatcggtaagtaatatgcat
ttagggtatttttctgatgaaagaaaaggtgatttgatcagtaaaatgaccaatgatatt
caggaggttgagaatagtattgttcagtccttaagggtgatttttaaagagcctgtaaca
gttattctttattttgctgtcttgtttttcatgtcctatcagttgacgctgttcacgata
ttactcattccggtttcaggagcgatcataggatatattaccaaaaagttaaagaagaaa
gcggagcaaagtcaagagtctttgggaagaatcgtgaatatattggatgaaaccatagga
ggaatgagggttgtcaaggcctttggagcaagaagttttgttcaaaataaatttgaggca
gaaacagattattatgctagggtaaatgtttctatggcaaggaagaatgagcttgcctca
cccgtcagccaatttttaggagtttcggtagttgccggtattttattatacggaggtaat
ttggttttgaacaatacttccgcattaagtgccagtgagtttattgcctatatcatttta
tttactcaagtacttaatcctgctaaagaaatttctagagcgctaagtagtatacaacga
ggactggcttctgcaagaagaatattcgcagtggttgacaccaaacctaggattgaaaat
gtagtttccccgcaagctttaaaaggattttcacaggctgtagtatttaagaatgtgggc
tttgcctatcaggaaaacgctgttttgaatggtgttaattttaagttagagaaaggtcgc
accatagctttggtaggtccttcaggtggaggaaagtctaccttggcagatttattgcca
aggttttatgatccaagtcaaggagaaataaccatagatggaattgacctcagaaattgt
agcatcgcagaccttagggggttgatgggaattgttacacaagagtctattcttttcaat
gatacagtattcaataatatagccttcggaatggagggggtttctttggagagagttcag
gaagctgccaaaattgccaatgctcatgaatttataatggagcttgagcaaggttatgaa
accaatataggtgaacgaggaggtaaattatcaggtggacaaaggcaacgcataagtatt
gctagggctgtattaaaaaatcctgaaattttaattttagatgaagccacatctgccctt
gattctgcctctgagaaattagttcaggaagctttgtctaatttaatgaaaaaccgtact
tctttggtgattgcacatcgtctgagtaccattcagcatgctgatgaaattttggttatt
gaaggtggaagtatagtggaaagaggaactcatgatgagttgatccaaaaaggaggattg
tataataaactttcccaaatgcagtctgtttag
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