Cyclobacterium marinum: Cycma_0824
Help
Entry
Cycma_0824 CDS
T01592
Name
(GenBank) ATP-binding cassette protein, ChvD family
KO
K06020
energy-dependent translational throttle protein EttA
Organism
cmr
Cyclobacterium marinum
Brite
KEGG Orthology (KO) [BR:
cmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cmr03016
]
Cycma_0824
Transfer RNA biogenesis [BR:
cmr03016
]
Prokaryotic type
tRNA transport factors
tRNA export factors
Cycma_0824
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
ABC_tran_Xtn
SMC_N
MMR_HSR1
AAA_23
AAA_29
Dynamin_N
RsgA_GTPase
NB-ARC
nSTAND1
AAA_15
AAA_18
AAA_16
DLIC
AAA_22
ABC_tran_CTD
FeoB_N
PCRF
AAA_27
Motif
Other DBs
NCBI-ProteinID:
AEL24598
UniProt:
G0J3F9
LinkDB
All DBs
Position
complement(965749..967428)
Genome browser
AA seq
559 aa
AA seq
DB search
MSNEKIIFSMAGVSKVYPPQKKVLKDIYLSFFYGAKIGVLGLNGSGKSSLLKIIAGMETE
YQGEVVWSPGYSVGMLQQEPVLDPTKTVKEVVEEAVSDTVNLLKEFEQINEKFMDPAVME
DPDAMQKLIDQQGEVQEKLDAANAWELETMLEKAMDALRLPPADAIVENLSGGEKRRVAL
CRLLLQEPDVLLLDEPTNHLDAESVLWLEQHLKNYKGTVIAVTHDRYFLDNVAGWILELD
RGEGIPWKGNYSSWLEQKQDRLKQEEKTESKRQKTLERELEWIRMSPKAKQSKGKARLNA
YDKLVGEDAKEKESKLELYIPPGPRLGSKVIEVKGVSKAFGDKLLFDDLTFSLPQGGIVG
VIGPNGAGKSTLFNLITGDEKPDAGHFEIGETVEIAYVDQEHDTLDPNKTVYETISEGNE
YVQLGNKEVNSRAYVSRFNFGGADQGKKVGVLSGGERNRIHLAMTLKKGGNLLLLDEPTN
DLDVNTLRALEEALENFAGCAVVISHDRWFLDRICTHILAFEGDSNVYWFEGNFSDYEEN
KKKRLGDLTPKRIKYKKLK
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgagtaatgaaaaaataattttttctatggcgggagtttccaaagtttaccctccacag
aaaaaagtacttaaagatatttacctttcgtttttttatggtgccaaaataggcgttcta
ggacttaatggctctggaaaaagttccttgctgaaaataattgccggaatggaaaccgaa
taccaaggtgaagtggtgtggtccccgggatactctgtaggtatgttacaacaagagccg
gtattagaccctactaaaacggtaaaagaagtagtggaagaggctgttagtgataccgtt
aaccttttgaaagagtttgagcaaattaatgagaaatttatggatccggctgtcatggaa
gatccggatgccatgcaaaaattgattgatcaacaaggtgaggttcaggaaaaattagat
gccgcgaatgcttgggaattggaaaccatgttggaaaaagcaatggatgctttgcgtctc
cctcctgctgatgccatcgtagaaaatctatccggaggggagaaaagaagagtggcttta
tgtaggttgcttttgcaagagcctgacgtcttgttactagatgagcctaccaaccacttg
gatgctgagtcggttttatggcttgaacaacatttaaaaaattacaaaggcacagtaata
gcggttactcacgatcgatattttctagataatgtggccggctggattctagaactggac
agaggtgaagggataccttggaaaggaaattattcgagttggttagagcaaaagcaagat
cgcttgaagcaagaagaaaaaacagagtctaaacggcagaagacccttgaaagagaattg
gagtggatccggatgtcgccaaaggccaaacaatccaaaggtaaggcaaggttgaatgct
tatgataagcttgtgggtgaagatgccaaagaaaaagaatctaaacttgaactgtatatt
cctccgggaccaagacttgggagtaaggtcatagaagtcaaaggggtttcgaaagctttt
ggagataaattactatttgatgacctcactttttcattgcctcaaggcgggattgtagga
gtgattggtcccaatggtgcaggtaaatccacgctattcaatttaattaccggagatgaa
aaacctgatgccggtcattttgaaataggggaaacggtggaaatagcttatgttgatcaa
gaacatgacaccttggaccccaacaaaactgtatatgaaacaatttctgaagggaacgaa
tacgtgcaacttgggaacaaagaagtgaattccagagcgtatgtgagtcgtttcaatttt
gggggggctgatcagggtaaaaaggttggcgtactttccggaggtgaaagaaatcggatt
catttggccatgactttgaaaaagggaggaaacctcttacttttggatgagcctaccaat
gatttggacgtaaataccctaagagcgctggaagaagccttggagaattttgcaggatgt
gctgtggtaatctctcacgaccgttggttcctggatagaatatgtactcatattcttgcc
tttgagggggacagtaatgtgtattggtttgaaggcaatttctccgattatgaggaaaac
aagaaaaagcgtttaggggaccttacgccgaaacgaattaaatataaaaagcttaaataa
DBGET
integrated database retrieval system
