Cyclobacterium marinum: Cycma_0929
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Entry
Cycma_0929 CDS
T01592
Name
(GenBank) MutS2 protein
KO
K07456
DNA mismatch repair protein MutS2
Organism
cmr
Cyclobacterium marinum
Pathway
cmr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cmr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Cycma_0929
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmr03400
]
Cycma_0929
DNA repair and recombination proteins [BR:
cmr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
Cycma_0929
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
Smr
MSSS
MutS_III
Motif
Other DBs
NCBI-ProteinID:
AEL24701
UniProt:
G0J4N6
LinkDB
All DBs
Position
complement(1095331..1097724)
Genome browser
AA seq
797 aa
AA seq
DB search
MRLYPDNLEEKIDFDKIKDLIREECTGVLGADFVKKIAFSKDRKLLSRLLTQTEEFRQIL
VSGEPFPNNNYINIYPYLNKAKIEGTFLFEEDFHEIRLGLKTLESCVLFFKKNAEEYPQL
AQLLGMVEDNISLTFSIDRVLDDKGKMKDNASKELNIVRTQLAYEENRIRKVLDSLYRSA
KSQGFTPEDASITIRGGRMVIPILAEYKRRIKGFIHDESATGQTVYLEPAEVLDINNDIK
DLLYMERREVQKILTRLTDELREYIPILKRAFHFLGMVDFIRAKAKFAVKINGINPEMVK
EREMAWQKARHPLLEMSLKHQGKAIVPVSISLDPNHRLLVISGPNAGGKSVTLKTVALVQ
YMFQCGLLVPMEPKSKCAIFDQFFIDIGDEQNIENDLSTYSSHLMNMKHFTFFANKRTLF
FIDEFGTGTEPQFGGAIAEALLIALNKSGAFGLVTTHYGNLKQLASKSQGMVNGAMRFDV
DRLEPLYELEIGKPGSSFAFEIAGKIGIPKEIVLHAKAQIGETRVRYDKLLLKVESEKSK
YENLMVEAERKDRLLASRLKEYNALKATLEDQKKAIINEAKAQAKLLLDDTNRKIENTIR
SIKESQANKEATKKIRQELDDHKAGIKLEKKPIVQQETIKVESGAIGIGDQVRIKDNGAL
AEVLEIKGKQVVILIGDLKSTVKLNRLEKISNTSLKKEKRAIDKRMSYDTTSKMANFSPN
LDIRGKRGEEVFGLIQNFIDEAHMLGINDVKVIHGKGDGILRELTRNLLRNSSSVAGFSD
EHADRGGSGVTLVQFKD
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgagattgtatccagataatttggaggaaaaaatagactttgataaaatcaaagattta
ataagagaggaatgtacaggtgtactgggtgcggattttgtaaaaaaaattgctttctca
aaggacagaaagttactcagcaggcttttgacacagacagaagagttcaggcaaattttg
gtctcaggagagccgtttcccaataataattatataaatatttatccctatctcaacaaa
gctaaaattgaaggtacttttttgtttgaggaggatttccatgaaattcgtttgggctta
aagacccttgaaagttgtgtgctcttttttaaaaagaatgcggaggagtaccctcaactg
gctcagctcttggggatggtagaagataatatatccctcactttcagtattgatagagtc
ttggatgacaaggggaaaatgaaggacaatgcttcaaaggaattaaacattgttcggact
cagcttgcttatgaagagaatcgaataagaaaagtgttggatagtttatataggtctgca
aaatctcagggttttacgcctgaagatgcttccattacgattaggggagggagaatggta
attcccattcttgcagaatataaaagacgaatcaaaggctttatacatgatgaatccgca
acaggccagactgtatatttggagcctgcagaggtattggatatcaataatgatatcaaa
gatctcttgtatatggagcgtagggaggtacaaaaaatccttaccaggcttactgatgag
ctcagggaatatattcccattttaaagagggcatttcattttttaggaatggttgatttt
attcgggctaaagccaagtttgcagtaaagatcaatggtatcaatcctgaaatggttaaa
gaacgggagatggcttggcaaaaggccaggcaccctcttcttgaaatgtctcttaagcac
caaggcaaggccatagtgccagtttctataagcttggaccccaatcatcgcttgttggtg
atatcaggacccaatgctggaggaaagtccgtgacgcttaagactgtggcattggtgcag
tatatgtttcagtgtggtttacttgtgccgatggaacccaagtcaaagtgtgctatattt
gatcaattctttattgatattggagatgaacaaaatattgagaatgacctcagtacttat
agttcgcatttgatgaatatgaagcatttcacattttttgccaataaacgtacgttattt
tttattgatgaatttggtaccggaaccgaaccacagtttggcggagccatagctgaagca
ttattgattgcactgaataaatctggagcatttggtttggtgaccactcattatggtaac
ttaaaacaacttgcctctaagagtcaaggaatggtgaatggcgcaatgaggtttgatgtg
gatcgcctagagcctttgtatgagttggagatagggaagcccggaagttcatttgctttt
gaaattgcaggtaaaattggaattcccaaggagattgtacttcatgcaaaagcccagatc
ggagaaactagagtgcggtatgacaagttgcttttaaaagtagaaagtgaaaagagcaag
tatgaaaacctcatggttgaagctgaacggaaagaccgattgctggcttccagactgaaa
gaatacaatgcattgaaagcaacccttgaagatcagaaaaaggcaatcataaatgaagcc
aaagctcaagccaagctcttgttggacgataccaatcgaaaaattgaaaacaccattcga
tctattaaagaatcacaagccaataaggaggctaccaaaaaaataaggcaggaacttgac
gaccataaagccgggattaaactggaaaagaagccaattgtacaacaggaaaccataaag
gtggaaagtggagccattggcattggagatcaagtaaggatcaaagacaatggcgctttg
gctgaagtattggagatcaaaggtaagcaggttgttatccttattggtgaccttaaatca
acggtgaagctcaaccgattggaaaagatatccaatacctctcttaaaaaagagaaaagg
gcaattgataaaagaatgagttatgataccacttcaaagatggctaatttttctccgaac
ctagatattagagggaaacgaggagaggaagtttttggattgattcaaaactttatcgat
gaagcacatatgctaggtatcaatgatgtgaaggtaatccatggaaagggtgatggaatt
cttagggaactgacgaggaatctacttagaaactcatcttcagtcgcaggtttttctgat
gagcacgcagataggggaggttcaggggtaacattggtgcagtttaaagattaa
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