Cyclobacterium marinum: Cycma_1027
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Entry
Cycma_1027 CDS
T01592
Name
(GenBank) nuclease SbcCD, D subunit
KO
K03547
DNA repair protein SbcD/Mre11
Organism
cmr
Cyclobacterium marinum
Brite
KEGG Orthology (KO) [BR:
cmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmr03400
]
Cycma_1027
DNA repair and recombination proteins [BR:
cmr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Cycma_1027
Archaeal homologous recombinant proteins
Cycma_1027
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Metallophos
Metallophos_2
DUF4202
Epimerase_2
Motif
Other DBs
NCBI-ProteinID:
AEL24799
UniProt:
G0IVN2
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All DBs
Position
1207856..1209136
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AA seq
426 aa
AA seq
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MIHLNPNRLTILLSTMKQIKILHTADWHLGKRLQEASRLEEQKLVLEEIIDIANSEDVDL
VLLAGDIFDGFNPSHEAIELLYKTLRKLSKNGQRPVVAISGNHDSSQFIEAPDPLAREMG
IFFYSRYDSIIPTGKLDSGIEVVASDKGFISLQLPHLDFPVRIILAPYANEVSLRTYLGE
GDRENELRKVLEEKWKNLADQFCDNSGLNVFLGHFFFVKEGTTPEKEPESERPILHVGGT
QALYTSNIPSQIQYAALGHLHRYHAASKSPFPVVYSSSPLAYSFSEAGQEKQVVLITGIP
NEPINYQPIALKQGRKLERKKFSDLPSALEWLENNPYCFVELTYETDDAIDAATRKSLLQ
AHDWIINIIPQIKNLGIDQDQQLQVKDLEKDMTSLFKMYYQSEKGQLPNEALLSVFNEIL
SQDDKI
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
ttgatccatttaaaccccaataggttaaccatattattgtcgacaatgaagcaaattaaa
attttacatacagccgattggcatttaggaaaaaggcttcaggaagcttcccgattggaa
gaacaaaagcttgtcctcgaggaaataatcgacattgccaattcagaagatgttgatttg
gttttacttgcaggagatatatttgatggattcaaccccagccacgaagcgatcgaattg
ctttacaagacacttcgaaagctttccaaaaatgggcaaagaccggttgttgccatctct
ggcaaccatgacagcagccaatttatagaagcgccggaccccttggccagggagatgggc
atatttttttacagccgatatgacagcatcattcccacaggtaaacttgacagtggtatt
gaagtggtggcctctgacaaaggctttatttcattgcagctccctcatttggattttccg
gtacgaataatattggctccttatgccaatgaggtttctttgcgaacctatttaggagaa
ggggatagagaaaacgaattgcgtaaagtactggaagaaaaatggaagaacttggctgat
caattctgtgacaactccggtttgaatgtattcctaggtcatttcttctttgtcaaagaa
ggaaccactccggaaaaagaacctgaaagtgaacgacccattttgcatgtgggaggaaca
caggctttgtatacgtcaaatatcccttcacaaatccagtatgcagcattgggccacttg
caccgctaccatgccgctagcaaaagtccctttccggttgtttattccagctctcctttg
gcttattcattcagtgaagccggccaggagaaacaggtggttctcattaccggcattccc
aatgaacccattaattatcaacctatcgccttaaagcaaggcaggaaactggaaagaaaa
aaattcagtgacttgccttccgccctggaatggctggaaaacaacccttattgttttgtg
gaattaacttacgagactgacgatgccattgatgccgccactagaaaaagtcttttgcaa
gcgcatgactggatcatcaacattattccccaaattaaaaacctcggcattgatcaagac
caacagcttcaagttaaagatttagaaaaagacatgacaagtttatttaaaatgtattat
cagagtgaaaaagggcaacttcccaatgaggccctgttgtcagtattcaatgaaatcctt
agccaagacgataaaatatga
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