Cyclobacterium marinum: Cycma_1320
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Entry
Cycma_1320 CDS
T01592
Name
(GenBank) Lytic transglycosylase catalytic
KO
K18691
peptidoglycan lytic transglycosylase F [EC:
4.2.2.29
]
Organism
cmr
Cyclobacterium marinum
Brite
KEGG Orthology (KO) [BR:
cmr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cmr01011
]
Cycma_1320
Enzymes [BR:
cmr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
Cycma_1320
Peptidoglycan biosynthesis and degradation proteins [BR:
cmr01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
Cycma_1320
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Gene cluster
GFIT
Motif
Pfam:
SLT
SBP_bac_3
Lig_chan-Glu_bd
SLT_2
Motif
Other DBs
NCBI-ProteinID:
AEL25091
UniProt:
G0J0W5
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Position
complement(1558749..1560149)
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AA seq
466 aa
AA seq
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MSKISISSVFLLIIAFELTSCKPNVEEKKVPEYWENPAVLDFDAIKKRGFIRAVVDNSST
SYYIYRGRTMGYEFELLRNLANQLGVSLRLIVKHDLEDGFRLLNKGKADIVAINFEVNEE
RKKLANFTAPLNSMKTVVVQRKDQSHVDSLTQLSNKKVYIKKGTIYKERLSVLSDSLSLS
LAIEEKNTSLEDLINQVIEEKIDYTVVDNDIALVNATYNDLLDVSLTVSQPNPVAWAIRK
NAPQLEAKINEWIERIDRTGYKAILYHKYFLNKKNSYHRSSSAFSSVSGDRISAYDEIIK
KGADNLGWDWRLLAALVYKESRFNHSAVSYAGAVGLLQLMPVTLQRFGVNDPNNPNESLR
GGVNYLKYLDGFWLDRVPDNNERIKFILASYNVGHGHVQDAWRLAYKYGKDNKRWKNVAY
YLERKSKPEVYRDPWVKSGYAKGHVTVRYVREVYGLYESYKVLVAS
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaatcagcatttctagcgttttcttgcttattatagccttcgaattgacttct
tgcaagccaaatgtagaagaaaaaaaagtgccggaatattgggaaaaccctgctgtgtta
gattttgatgccattaaaaaaagaggttttattagggcagttgtagataactcttctacc
agctattatatctataggggtcggaccatgggctatgaatttgagttgctgcggaatttg
gccaatcaattgggagtgagtctaaggttaattgttaagcatgacctagaagatggattt
cgcctcctgaataaggggaaagcagatattgttgccataaactttgaagtgaacgaagag
cgaaaaaagttagccaattttacggcacctcttaatagcatgaaaacggtggtggtccag
cgtaaggatcaatcccatgtggatagcctaacccaactttctaataaaaaggtttatata
aaaaaaggaacgatttataaagaaaggctttctgtacttagcgattctctctcactttcc
ttggctatcgaagaaaagaatacaagtttggaagacttgatcaaccaggtaattgaagaa
aagattgactatacggtagtggacaatgatatcgctttggtgaacgcaacctacaatgac
ctgttagatgtaagccttacggtgagtcaacctaaccctgtagcttgggccatcagaaaa
aatgccccccagttggaagccaagatcaatgagtggatagagagaatagatcgaacaggc
tacaaagccatattgtatcacaagtattttcttaataagaaaaacagttatcacaggtcc
tcttcagctttttcttcagtttcaggtgataggatttctgcttacgatgaaattataaaa
aaaggtgccgataacctgggctgggactggaggttattggctgccttagtgtataaagaa
agtcgctttaaccattccgctgtctcctatgcaggagcagtaggtttgctacagttgatg
cctgttaccttgcagcgctttggggtaaatgacccaaacaatcccaatgaaagtttaaga
ggaggggtgaattatctcaaatacttggacggattttggcttgaccgagtgcctgataac
aatgaaagaataaaatttattttggcttcctacaatgtggggcatggtcatgttcaagac
gcttggcgcttggcctataaatatgggaaagacaacaaaaggtggaagaatgtggcctat
taccttgagagaaagtccaaacctgaagtgtatcgagatccgtgggtaaaaagtgggtat
gccaaaggccatgtgacggttcgctatgtgcgagaggtctatggactatatgagtcctat
aaggttttggtagcttcttaa
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