Cyclobacterium marinum: Cycma_1788
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Entry
Cycma_1788 CDS
T01592
Name
(GenBank) PKD domain containing protein
KO
K08738
cytochrome c
Organism
cmr
Cyclobacterium marinum
Pathway
cmr00190
Oxidative phosphorylation
cmr01100
Metabolic pathways
cmr02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
cmr00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
Cycma_1788
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Cycma_1788
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThuA
GSDH
PKD
PKD_4
Cytochrom_C
Cytochrome_CBB3
Big_9
K319L-like_PKD
Y_Y_Y
Big_11
Aha1_N
Motif
Other DBs
NCBI-ProteinID:
AEL25541
UniProt:
G0IVZ6
LinkDB
All DBs
Position
2083998..2087432
Genome browser
AA seq
1144 aa
AA seq
DB search
MSKNSVMKGFCALIFAMFLLGACTSRPGEPKVLVFSKTNGFYHESIPDGNQAIINLGKQN
GIEVDTTTNAKMFTEDILKEYSTVIFLNTTGDVLNNAQQAEFERYIQAGGGFVGIHSAAD
TEYSWDWYGKMVGGYFTDHPGINDPHPNVQEGSLKIIDKSNSATSFLPETWSRTDEWYSY
KNFNPDVNVLISLDEDSYQGGADMGEHPIAWYHEYDGGRAFYTGGGHTRAAYKEELFLKH
LLEGIKYAIGENEKLNYANATSKSVPDADRFEKVNLVMGEFKEPTEMAILPNLDILVSQR
RGEVLLYKNGSNEVNKVAHLDVYWKTDVPKVNAEEGLMGIQVDPDFENNHWIYVFYSPTD
ESVNRLSRFKFENDTWDMESEQVILQFYSQRGICCHTGGSIAFDGNGLLYVSAGDNSTPF
NQPDQKYTLQGYGPLDDRPGFEQYDAARSSGNSNDLRGKILRIKVNEDGSYSIPEGNLYP
EGTEKTRPEIYVQGNRNPYRISVDKKTGFLYWGEVGPDAREDKFGERGSRGYDEVNQAKE
AGYFGWPFFVGNNYPYNAFNFDTGEVGKEFDPKNPVNNSRNNTGIKNLPPAQPAFIYYPY
VESEAFPEVGTGGRNAMAGPVYYSDLFPNGGGLPEYYDGKLFIYDWIRGWIKVVTMDENG
DYLKMEPFMEEVRHNALIDMELGPNGKLYLLEYGKGWFSANADAALSVIEYNPGNRSPVI
ASISADKTSGSLPLALTVKVAASDPENDALSYIWDLGNGETKETSVPEISYTYDKQGDYD
ISVTVKDSENKTAKSNVVNVYAGNIAPSINVTFEGNGSFYFPNQKVNYEVTVTDPDDPSV
GEDLSSLYLSADYIEGFDKAEAALGHQVMSEAMAGKSLMESLTCKSCHQIDGKSVGPGYT
DVAKKYADSPEAVDKLINKIIKGGSGVWGETMMPANPTLKEGDARKIVAFVLSLDGKDDQ
EPSLPAKGELDPLQGKKLANNGVMLLNASFTDKGGNNIKPLSTSKTVFLRNNNINLGELD
ATYAYNSMEINGQQIITSPLGKGYFMLQNIDLTGLEGINFMVSSQRPFDYGYQIEARSGG
SDGEVIGQMVVRKSGEEGANTQKVVLKFNENVKEDFQDLYIVTEALNENETVNMAILSME
MVSK
NT seq
3435 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaaaatagtgtcatgaagggattctgtgcccttatatttgcaatgttcctactg
ggagcttgtaccagtagacccggagaaccaaaagtactcgttttttcaaaaaccaatggc
ttttaccacgaatccataccggatggaaatcaagcaattattaatttaggaaaacaaaat
ggcatagaggtagacactactaccaatgcgaagatgtttactgaagacattttaaaggaa
tacagtactgtaattttcctaaataccactggtgatgttttgaataatgctcaacaggcg
gagtttgaacgatacattcaagctggcggtggttttgttggcatccattcagctgcagat
accgaatacagttgggattggtatggtaagatggtaggcggctattttacagatcatccc
ggcatcaacgatcctcatcccaatgtgcaggagggatcgctcaaaatcattgataaaagc
aacagcgccacttcttttcttcctgaaacatggtcaagaacggatgagtggtacagctac
aaaaatttcaatcctgatgtgaacgttttgatctcattagatgaagacagttatcaaggc
ggagcagatatgggcgaacaccctatcgcatggtaccatgaatacgatgggggtcgggca
ttttatactggaggaggccacaccagagcagcttataaagaggaactctttttgaaacat
cttttagagggaattaagtatgccattggggagaatgaaaagttaaattatgccaatgct
acaagtaaatctgttcctgatgcagaccgttttgaaaaagtaaacttggtaatgggagag
ttcaaagaacctaccgaaatggctattttaccaaatttagatattctggtttcccaaaga
agaggagaggttttgctttacaaaaatggtagcaatgaagtaaataaagttgcccacctg
gatgtatattggaaaacagatgtacctaaggtcaatgcagaggaaggattaatgggtatc
caagtagatcctgatttcgaaaataatcattggatatatgtcttttatagtccaacggat
gagtctgtcaacagactttcaaggtttaaatttgagaatgatacgtgggacatggagtct
gaacaagtaatccttcagttttattctcaaagaggcatttgctgccatacaggaggatca
attgcttttgatggtaatggtttgctttacgtttcggcaggagataattccacgccattt
aatcaacctgatcaaaaatacaccttacaaggttatggtcctttggatgatagaccaggt
tttgagcaatatgatgcggcaagatcttcaggaaactccaatgatttgagaggaaaaatc
ctaagaataaaagtaaatgaagatggttcttacagcattcccgaagggaacctttatcct
gaaggaactgaaaaaaccagacctgaaatttatgtgcaaggaaatcgaaacccttaccga
atttccgttgataagaaaaccggctttttgtattggggtgaagtaggtcctgatgcgcga
gaagacaagtttggagaaagaggatcaagaggatatgatgaggttaaccaagcaaaagag
gctggttattttggctggcctttctttgtaggaaacaattatccttacaatgcctttaat
tttgatacaggagaagttggtaaggaatttgacccaaaaaatcctgtcaataactctagg
aacaataccgggattaaaaatctgcctcctgctcagccggcattcatttattatccatat
gtagagtcagaagcatttcctgaagtaggaacaggcggaagaaatgccatggcaggtcct
gtatattattctgacctctttcctaatggaggtggtttaccggaatattatgatggcaaa
ctatttatctacgactggattaggggttggattaaggtagtaaccatggatgaaaatggg
gattacctaaaaatggaaccttttatggaagaagtcagacacaatgccttaattgacatg
gaattaggtccaaatggtaaactttaccttctagaatacggtaaaggctggtttagtgca
aatgcagatgcagccctctcagtaattgaatacaatccgggaaacaggtcaccggttatc
gcctcaatttctgcagacaaaacttcaggtagtttacctttagcattaaccgtaaaggtt
gctgcgagtgatcctgaaaatgatgccttaagctatatttgggatttaggtaatggcgag
accaaagagacttcagtgccggaaatctcttacacctatgataaacaaggtgattatgat
atttcagtaacggtgaaagacagtgaaaacaagaccgcaaaaagcaatgttgtcaatgtt
tatgcaggaaatattgcccctagcattaatgttacttttgaaggaaatggaagcttttac
tttcccaaccaaaaagtaaattatgaggtcacagtaactgatcctgacgatccatcagta
ggggaagacctttcatcactttacctctctgccgattatatcgaaggttttgataaagca
gaagcagccttaggtcaccaagtcatgtctgaagccatggccggtaaaagtttgatggag
tctttgacatgtaaaagttgtcaccagattgacgggaaatccgtaggcccgggatatact
gatgtggcaaaaaaatatgccgattcaccggaagcggtagacaaattgatcaataaaatt
atcaaaggaggttctggtgtctggggagaaacgatgatgccggccaatcctactttgaaa
gaaggagatgcaaggaaaattgtcgctttcgttctttctttggatggaaaggatgatcag
gaaccaagccttcctgcaaaaggtgaactggatccacttcagggtaaaaaacttgccaat
aatggagtaatgctactgaatgcaagttttaccgataaaggtggaaacaatatcaaaccg
cttagtacatcaaaaactgtttttcttcgcaacaataacatcaacttaggtgagcttgat
gccacatatgcttataattctatggaaataaatggtcaacagatcatcacctctccatta
ggcaaaggctattttatgcttcaaaatattgacctgacagggttggaaggcataaacttt
atggtaagttctcaacgaccttttgattatggataccagattgaagccaggtccggagga
tcagatggagaagtcatcggacaaatggtggttagaaaaagtggagaagaaggtgccaat
acccaaaaagtagttttaaaattcaatgaaaatgtaaaagaagattttcaagatctatac
attgttacagaagcgttgaatgaaaacgaaacagtaaatatggctattctatcaatggaa
atggtcagcaaataa
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