Cyclobacterium marinum: Cycma_2403
Help
Entry
Cycma_2403 CDS
T01592
Name
(GenBank) transcriptional regulator, DeoR family
KO
K02081
DeoR family transcriptional regulator, aga operon transcriptional repressor
Organism
cmr
Cyclobacterium marinum
Brite
KEGG Orthology (KO) [BR:
cmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cmr03000
]
Cycma_2403
Transcription factors [BR:
cmr03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
Cycma_2403
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DeoRC
HTH_DeoR
HTH_11
Put_DNA-bind_N
GntR
HTH_20
Fe_dep_repress
MarR
LexA_DNA_bind
HTH_Mga
DUF6293_C
HTH_5
MarR_2
HTH_12
Motif
Other DBs
NCBI-ProteinID:
AEL26145
UniProt:
G0J6U7
LinkDB
All DBs
Position
complement(2808938..2809699)
Genome browser
AA seq
253 aa
AA seq
DB search
MIIAKRHKYILDKLKEAGYVSVAALSREMDVTMVTVRKDLRILEEKGLLFRTHGSATPVS
PYVNDKPVTEKRLVQVSQKNAIAKKASELLVQGDVIIIGSGTTVLAFAQSIPRTLSLTVL
TAAMNVSMALMDVPKAEVVQLGGVVRKSSSSVVGHFAENMIKDFACSKLFISVDGIDPEF
GLTTSNLLEAHLNSIMIASAQKTIVLADSSKFGKKSFGKIAKIEDIDTLIVDKNLSAHYV
EMLEEKGVEVILV
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atgattattgctaaaagacacaaatacatattagacaagcttaaggaagcaggttatgta
agtgtagctgctttgagtagagaaatggatgtcacaatggtcacggtgaggaaagacctt
agaattttggaagaaaagggcttgctattcaggacacatggaagtgccactcctgtatct
ccctatgtcaatgataaacctgtcaccgaaaagcggctggtccaagtcagccaaaagaat
gccatagctaaaaaggcatccgaattgctagttcaaggtgatgtcataattattggctcc
ggcacaacggttttggcctttgcccaatccataccaaggacactttctcttaccgtttta
actgcggcgatgaatgttagcatggcattaatggatgtccctaaggctgaggttgtacag
ttgggcggtgtggtgcgtaagagtagcagttcagtcgttggtcattttgccgaaaacatg
ataaaggattttgcctgcagcaaattatttatcagtgtagacggtattgatccagaattt
gggctgactacttccaatttattggaagcgcacctaaacagcattatgattgcttctgcc
caaaaaaccatagttttagcagacagcagcaaatttggtaaaaaaagttttggtaagatt
gccaagattgaagacatagacacattaattgtagacaaaaatttatccgcacattatgta
gaaatgcttgaagaaaaaggagttgaagtgattctggtatag
DBGET
integrated database retrieval system
