Cyclobacterium marinum: Cycma_2978
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Entry
Cycma_2978 CDS
T01592
Name
(GenBank) RHS repeat-associated core domain-containing protein
Organism
cmr
Cyclobacterium marinum
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF6443
Ig_7
Motif
Other DBs
NCBI-ProteinID:
AEL26709
UniProt:
G0J443
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All DBs
Position
3478703..3483265
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AA seq
1520 aa
AA seq
DB search
MKPYLFSLLICVYGQYLFGQEVTQVQIIGPTTVSIGETALFEVNFWNGTTMVYPNNGIGS
MWSVPQATINYETYNSISLTFSSAGSFNLTYQFMTFDGNFNDNLQIRVPHINPCEEIEAS
AENVSRFESGSVELTASPSPAGFEYRWFASDQSTQLGTSQSFTTPTISATTTYYLAYVHT
SSGCMTPKVPVKAIVANHNYVKKYTAKKAGLDEMTIVSANSSQSQKQFAYHDGLGRTMQT
VGKESTVSGKDLIVPIAYDEYGMQTKELLPFSIANGRKPGDFRLSAINDQEAYYTSLYGE
NPSAYIEKEFEASPLNRVNKQAAQGNAWQMGSGKELKFFRRPNTTEEAVRVFTVNQSGLP
ESNSAFRANDLWVEITVDEDDKSTLTYTDKLDRVVLKKVQNTAAPTDEGHIGWLCTYYVY
DVFSRLSVVIPPRATQIIADANWSIDISTNASLAKEQYFRYTYDKRGRMIEKYIPGKGLE
SMVYDNQNRMVGVQDANMARETPRKWLYTKYDGLGRVVMTGMTSSNDDRASIQNSLNEMP
SNEASVNANTAKVKTGSRITSSKYDGYQEYVAEKSISLKPGFAMKATGNQNFTAQIGTRS
SGKVGVWPKDEDDILTVNYYDSYEFLSEFPYENPGAPFSPHPTKRIHGLQTGKKVKNLES
GEFYTTAIYYDEEGRVIQTIAQDQLGGTMLNSTAYNFEGQPIHTLISNNRAEIPDILRTF
TYNVTGQIASITHQVGSDPAITLAAYTYNDLGQLVSKSLSGQSAFSQTYDYNIRGWLNSQ
GSDEMGTFKQKLYYHTGSENKYYNGNIAGIEWEGQDGKARSFAYNYDNANRLLAAKFEAA
GENNHYSQGISYDANGNILTMDRFSEKSKTTYGKVDNLTYTYESNDDLGDNYSNKLLRVT
DGLVSNTHTAKDFKPNTGSQENYAYDANGNQTSNPDKRITKISYNHLNLPEEITFSNGGK
INFAYDAEGKKLSQTVQENQDKPAKTRDYIGELVFLNGSLDYMVHEEGRVANESNVYHYD
FYIKDHLGNVRQVLRQPKTETKLATMESQHVLKEQEDFFGLTASRQTDVEQNVTPGGDKV
AWLNAARGRVLGPSSRQEVFTGDQLNLSVYGKYEEQPLQKTNPAGFVNSGGKSKILDDLN
ELSKSTQQAGGANPITILNMIGIVATDLQQKQTPEAYLLYALYDSDGNRYEVGKQPLSRK
AANQHEVLEEKLYISQDGYMETVLVNETAEDVWFDDFSISRTPSIVIQETHYDPWGLELN
GLGYQNGGVKENKYLYNGKELIEDEGLEYYDYGARMYDPVIGRWGVVDPMADQMTRHSPY
NYAFDNPIRFIDPDGMMPRDCCPPSSEFIFVSEMHKKFDFIKSNLQNLLGAERTKNLNSQ
TAGIITETEFSSGPVDSGTNSDKIAGFVNMDGLSDVGKGSPSGGFMEKIANALSSILGLT
NELEKSATTMDGNSDETIIKNSNIKEDTTFFDVKTYSNGVGRSIRYKRVIGTDTIQVTGT
GNGVNEGKKALESIKEKRDE
NT seq
4563 nt
NT seq
+upstream
nt +downstream
nt
atgaagccttacctcttttcacttttaatctgtgtttatgggcaatatttgtttggccaa
gaggttactcaggttcagataataggccctactactgttagtataggagaaacagcctta
tttgaagttaatttttggaatgggactactatggtatacccaaacaacggaattggaagt
atgtggtctgttccccaggcaaccatcaattatgagacctataattccataagcctgact
tttagctcagccggttcttttaacttgacctatcaattcatgacctttgatgggaacttc
aatgacaacctacaaatacgggtaccccacataaacccttgtgaggaaatagaggcttca
gctgaaaatgtttcacgctttgagagtggttcagtagaacttacagcgtctccttctcct
gcaggttttgaataccgatggtttgcttccgaccaaagcactcaactagggacatcccaa
agtttcaccacacctactatctccgcaacgactacttactacttggcatatgttcatacc
tcttccggctgtatgacacctaaagtaccggtaaaggcgatagttgccaaccataattat
gtaaagaaatatacagcgaaaaaagctggtttggatgaaatgacaattgtttcggccaac
tcaagccaatcacaaaagcaattcgcttatcatgatggacttggtcgtacaatgcagact
gtgggaaaagaaagcacggtttcaggcaaggatttgattgtacctatagcgtatgatgaa
tatggtatgcagacaaaggaattgctaccattctctattgccaacggccgaaaacccgga
gattttcggctttccgctattaatgaccaggaggcttattatacgtcattatatggagaa
aatccctcagcctatatagaaaaagaatttgaagcttcccctttaaacagagttaataaa
caagcagcacaaggaaatgcttggcaaatggggtccggtaaggagttgaaatttttcaga
agacccaatactacagaagaggccgttcgggtatttaccgtaaatcagagtgggcttccc
gaaagtaattcagcgtttcgtgcgaatgacctgtgggtagagattactgtagatgaagac
gataaaagtacccttacctacacggataaattagatagggtagtgttaaaaaaagtgcag
aatactgctgcacctacagatgaaggccatataggttggctttgtacctactatgtttat
gatgttttctcaaggttaagcgtggtcattcctcccagggccacccaaattattgccgat
gcaaactggagtattgatatcagtaccaatgcaagcttggcgaaagaacaatattttcgc
tatacctacgataaaagggggagaatgatagaaaaatacattcccggaaaaggattggaa
tccatggtgtatgacaatcaaaacagaatggtaggagttcaggatgccaatatggctaga
gagacccctagaaaatggctttacaccaaatatgatggacttggaagagtagtgatgacc
ggaatgaccagctcaaatgatgaccgggctagtattcaaaatagcctcaatgagatgcct
tcaaatgaagcctcagtaaatgccaatacagctaaggtaaagacaggatctagaattact
tctagtaaatacgatggatatcaggagtatgtggctgaaaaatccatcagcctaaaaccc
ggatttgctatgaaagccacagggaatcaaaatttcactgctcagataggaacaagaagt
tcaggcaaggtgggggtttggcctaaagatgaagacgatatacttactgtgaattattac
gattcctatgaatttcttagcgaattcccctatgaaaaccctggtgctcctttctctcct
catccaacaaaaaggattcatggcttacagacgggaaaaaaagtgaaaaatctggaaagc
ggggaattttataccacggcaatctattacgatgaggaaggacgagtgatacaaaccatt
gctcaagaccagcttggggggaccatgctgaattccactgcctataattttgagggtcaa
ccaattcatacattgatttcaaacaatagggctgaaatcccggatattctccgaactttt
acctacaatgtcaccggtcaaattgcctcgataacacatcaagttggctccgatcctgct
attaccctggctgcttatacttataatgacctagggcagcttgtttccaaatcattatcg
ggccaatcagctttcagtcaaacatatgactataatattagagggtggttaaatagccag
ggtagcgatgaaatggggacattcaaacaaaaactctattaccataccggtagcgagaat
aaatattacaatggaaatatagcaggcatcgaatgggagggacaggacggtaaagcgagg
agcttcgcttacaattatgacaatgccaatcgactgttagctgcaaagtttgaagcagca
ggggaaaataaccattattcccaaggaatcagctatgatgccaatggaaatattctgacg
atggataggtttagcgaaaaatcaaaaaccacctacggaaaagtggataatttgacctac
acttatgaaagcaatgatgacttaggggacaattattccaataaactgttacgcgtcaca
gacgggttggtttccaatacccataccgcgaaagattttaaacccaataccggatcccaa
gaaaattacgcctatgatgccaatggaaaccaaacttctaatcccgataagaggattact
aaaatcagctacaaccacctgaatttgcccgaagagatcactttttccaatggagggaaa
attaactttgcctatgatgcagaggggaaaaagctaagccagacggttcaggagaaccaa
gacaagcctgctaaaactagagactatattggagagctggtgttcctaaatgggagcttg
gattatatggttcatgaagaaggcagggtggcaaatgaatcaaatgtctatcattatgat
ttttatatcaaagatcatctaggcaatgtccggcaggtgcttaggcagcccaaaacggag
acaaagttggcgaccatggaaagccaacatgtactgaaagagcaggaagatttctttgga
ctaactgcttccagacaaactgatgtggaacagaatgttacccccggaggagataaagtg
gcgtggttaaatgcagcaagaggaagggttttaggtccctcaagtagacaagaggtcttt
acaggagatcagcttaacctaagtgtctatggcaagtacgaagaacagccacttcaaaaa
acaaaccccgcaggatttgtaaacagtggagggaaaagcaaaattctcgatgacctcaat
gaactgtccaaaagtacacaacaagcaggaggagccaacccgataacgatattaaatatg
attggcatagtggcgacagacctacagcaaaagcaaacccctgaagcttacttgctttat
gccctctatgacagtgatggcaatcgctacgaagtaggcaagcaacccttaagcagaaaa
gccgccaatcagcatgaagttttagaagaaaaattgtatatttcacaagacggatacatg
gaaaccgttctggtcaatgaaaccgctgaggacgtttggttcgatgattttagtatatca
agaaccccttcgatagtgattcaagaaacccattatgatccttggggtttggagttgaat
gggctagggtatcagaatggtggtgtcaaggagaataagtatttgtataatgggaaagag
ctgatcgaggacgaagggctggagtattatgattatggggcgaggatgtatgacccggtg
ataggaagatggggagttgtggatcctatggcagaccaaatgacaagacattcgccctac
aattatgcgtttgataaccctataaggtttattgatccggatgggatgatgcctagggat
tgttgtccaccttcttctgaatttatttttgtttcggagatgcataaaaagtttgatttt
attaaatcaaatctgcaaaatttattaggagctgaaagaactaagaatttaaatagtcaa
accgcaggaataattactgaaacagaatttagtagtggtcctgtagattctgggacaaat
agtgataaaatagctgggtttgtaaacatggatggtttgagtgatgttggaaaaggatca
ccttctggtggatttatggagaagattgctaatgcgttaagctctatacttggtttaaca
aatgaattggaaaaatctgcaacgaccatggatggaaattcggatgaaacgattattaaa
aattctaatattaaagaggataccaccttttttgatgttaaaacctatagcaatggcgtt
ggaaggagtataagatataaaagggttattggtactgatacgatacaagttacagggacg
ggaaatggagttaatgaaggtaaaaaggccttggaaagtattaaagaaaagagagatgaa
taa
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