Cyclobacterium marinum: Cycma_4250
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Entry
Cycma_4250 CDS
T01592
Name
(GenBank) DNA gyrase, A subunit
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
cmr
Cyclobacterium marinum
Brite
KEGG Orthology (KO) [BR:
cmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cmr03032
]
Cycma_4250
03400 DNA repair and recombination proteins [BR:
cmr03400
]
Cycma_4250
Enzymes [BR:
cmr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Cycma_4250
DNA replication proteins [BR:
cmr03032
]
Prokaryotic type
DNA Topoisomerases
Cycma_4250
DNA repair and recombination proteins [BR:
cmr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Cycma_4250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Retrotran_gag_2
DUF5431
HCP
DUF4168
Motif
Other DBs
NCBI-ProteinID:
AEL27953
UniProt:
G0IWF9
LinkDB
All DBs
Position
complement(5167711..5170263)
Genome browser
AA seq
850 aa
AA seq
DB search
MAQGENENIIPINIEDEMRGAYIDYSMSVIVSRALPDVRDGLKPVHRRILYGMQELGVSH
NKPYKKSARIVGEVLGKYHPHGDSAVYETLVRMAQTWSLRYPLVDPQGNFGSIDGDNPAA
MRYTEARLRRIAEELLTDINKETVDFQLNFDDTLKEPIVLPAKIPALLLNGASGIAVGMA
TNMAPHNLGEVIDGIHAYIDNNDITIPELMEHIIAPDFPTGGIIYGYNGVKAAFETGRGR
VILRGKATVETKASGKEMIIINEIPYQVNKASMVEKTAQLINEKKIDGISAIRDESDRQG
MRIVYELKKDAVPNVVLNNLYKHTQLQTSFSVNNVALVNGRPFTLNLKELILHYVEHRHD
VVVRRTQYELREAEKRAHILEGYLVALDNIDEVIQLIRDSKDPETARNGLMEKFDLTEIQ
ARAILDMRLQRLTGMERAKIQQEYDELMKLIEELKDILANKDRRMQIIKDELEEIKNRYN
DERRTTIEHNAEDFNYEDMIPNEEVVITVSNQGYIKRTVLTEYKSQSRGGVGSRGVSTKE
DDYTVYLFTALTHNYLLIFTDQGKLFWLKTYAIPEGSKTSKGRPIQNLINIESTDRIRSI
IQVKDLGDVDYINNNNIVMITKKGIIKKTTLEQYSRPRTNGIIALNIREDDQLLNVELTN
GDANIVIASSSGRAVHFHESNVRPMGRTATGVKAINLDGEENHVIGMVCVQREDATLLVV
TEKGYGKRSFLSEYRITNRGGKGVKAMNITEKTGGLVAIKEVVDTDDLMIINRSGITIRT
PAEGIRVMGRATQGVRLIRLNENDEISSVEKIENIETEEPDSTVEDEGTDNTNDSENSQT
GENEENPNKE
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
atggctcaaggagagaacgagaacatcatcccgattaatattgaggacgaaatgcgtggt
gcttacatcgattattcgatgtcagtaattgtttccagggctttgccggacgtaagggac
ggtttaaagcctgtacaccgcagaatcctttatggaatgcaggagttgggggtttcccac
aacaagccttataaaaaatctgcaagaatagttggtgaggtattaggtaaataccatcca
catggagattcggctgtttatgaaactttggttagaatggcccaaacatggtcgttgcga
tacccattggtagatccacaaggaaactttggatcaattgatggcgataatcctgcagcc
atgaggtataccgaagcaaggttgaggagaattgctgaagaattgttgacagatattaac
aaagaaacagtagattttcagttaaactttgacgataccttaaaggaaccaattgtactt
ccggctaaaatccctgctttattattgaatggagcatccgggattgctgtaggaatggca
accaatatggctcctcataatttgggagaagtcatagacggaattcatgcctatatcgat
aacaatgacatcacgattcctgaattgatggagcacataattgctccggattttcctacg
ggaggaattatttatggctataatggagtgaaggctgcctttgaaaccggtagaggccgg
gtaattcttagaggtaaagctaccgttgagaccaaggcctcaggaaaggaaatgatcatt
atcaatgaaattccttaccaggtgaataaggcgtcaatggttgagaaaaccgctcaactc
atcaatgaaaagaaaattgatgggatttctgccataagagacgaatcggataggcaagga
atgcggattgtttatgagctcaaaaaagacgctgtacccaatgtggtactcaacaatctt
tacaagcacacccaactgcaaacttcttttagtgtaaacaatgtggctttggtcaatgga
agaccattcacattaaatcttaaagaacttattcttcattatgtagaacacaggcatgat
gtagttgtaagacgtacgcaatatgaactaagagaagctgaaaaaagagcacatatattg
gaaggttacttggtagccctagacaatattgatgaagtaattcagttgatcagagattca
aaagatccggaaacagccagaaatggtttgatggaaaaatttgatcttacagagatacag
gcacgagccattttggacatgaggttgcaacgccttaccggaatggaaagggccaaaatt
cagcaagaatacgatgaattgatgaaacttattgaagaattgaaagatattctggccaat
aaggatcgaagaatgcaaatcattaaggacgagctggaggagattaaaaaccgctacaat
gacgagagaaggaccaccattgaacacaatgctgaggacttcaattatgaggacatgatt
cctaatgaagaagtagtaattactgtatccaaccagggctatatcaaaaggaccgttctc
acagaatataaatctcagagtagaggtggtgtaggatccagaggtgtcagtaccaaagag
gacgattataccgtttatctatttactgccttaacacataactatttactgatctttacg
gatcaaggtaaattattctggcttaaaacctacgccattcctgaaggtagtaaaacatct
aaaggcagacctatacaaaaccttatcaatattgaaagtaccgatagaattagatctatt
attcaagttaaagatcttggagatgtagactatatcaataataacaatattgtgatgatt
accaaaaaagggatcatcaagaaaactactttggagcaatattccagaccaaggaccaat
ggtattatcgccttgaatatcagggaagatgatcagttgctaaacgttgaactgaccaat
ggagacgcgaatattgtgattgcttcaagttcgggaagagcagttcattttcatgaatcc
aatgtgaggccaatgggtcgaactgcaaccggggtaaaagccattaacctagatggggaa
gaaaaccatgtaattggcatggtttgtgttcaaagagaagatgcaacgcttttagttgta
actgaaaaaggatatggaaagcgttcctttttgtctgaatacaggataaccaataggggt
ggaaaaggtgtgaaagccatgaacatcacagaaaaaaccggggggttggtagccattaaa
gaagtagtggataccgatgacctgatgattatcaatcgttcagggattaccattaggact
ccagctgaaggaatcagagtgatgggaagagctacccaaggtgttagattaattcgattg
aatgaaaatgatgaaatttcatctgtagaaaaaatcgaaaacattgaaaccgaagaaccc
gacagtactgtggaagatgaaggaactgataacaccaacgattccgaaaattctcagaca
ggggaaaacgaagaaaatcctaataaagaataa
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