Cyclobacterium marinum: Cycma_4870
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Entry
Cycma_4870 CDS
T01592
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cmr
Cyclobacterium marinum
Brite
KEGG Orthology (KO) [BR:
cmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cmr03016
]
Cycma_4870
Enzymes [BR:
cmr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Cycma_4870
Transfer RNA biogenesis [BR:
cmr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Cycma_4870
Prokaryotic type
Cycma_4870
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AEL28555
UniProt:
G0J6P0
LinkDB
All DBs
Position
5933857..5934546
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AA seq
229 aa
AA seq
DB search
MDKQQKPYGEVFLVNKPYQWTSFDVVKKIRNTLKIKKVGHAGTLDPLATGLLIVCAGKET
KNIEKYQAQKKEYSGTFVLGKTTESFDLEQEVKTVADPFHLTREDIEKAVASLTGDIMQI
PPNHSAIKKDGKRVYESARKGITVVLDPRPVTVEIFEITGIELPEIHFRIVCSKGTYIRS
LARDLGDKLEVGAYMSALRRDAIGEFKLKNAWQLEQLIEKIKKEQNENL
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atggacaaacaacaaaaaccatatggagaagtatttcttgtcaataagccctaccaatgg
acttcctttgatgtagttaagaagattagaaataccctcaaaataaaaaaagtaggtcat
gcaggcacacttgaccccttagccaccggactactaatagtttgtgcaggaaaggaaacc
aaaaacattgaaaaatatcaagcccaaaagaaagaatattcaggcacatttgttttgggt
aaaacgactgagtcatttgatttagaacaggaagtcaaaacagttgctgatccctttcat
ttaaccagagaagatatagaaaaggctgtagcaagtcttaccggtgatatcatgcaaatc
cctcccaatcattctgccattaaaaaagacgggaaacgggtttatgaatcagcaagaaaa
ggaataactgtagtattagaccccagaccagttactgtagaaatctttgaaataacaggt
atagaacttccggaaattcatttcagaattgtatgctccaaaggcacctatattagaagc
ttggcaagagatttgggagacaaattggaggtaggtgcctatatgtcagccctcaggcga
gatgctataggggaatttaaacttaagaatgcttggcaactagagcaattgatagaaaaa
atcaaaaaagagcaaaatgaaaatttataa
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