Clavibacter sepedonicus: CMS0033
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Entry
CMS0033 CDS
T00678
Name
(GenBank) putative sortase-processed secreted protein
Organism
cms
Clavibacter sepedonicus
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
Motif
Other DBs
NCBI-ProteinID:
CAQ00159
UniProt:
B0RHA1
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Position
37602..41009
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AA seq
1135 aa
AA seq
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MRVPRVFRRQNAGNIRCTIAMIATSAVMITGLGAMPASAETAAGLVQFEDQTQDPAVINK
QMQDEAQKAAKAAVWTPGTIPAEPADADKPAPELPQWKVPNPDRKLGQAVSTQRVPAGTP
VGAPGLGALPYMSFEDISLSDDTVARVNLANGNLLLTANDGTSSAAGIGVRADRYYNGLS
SSAGALGGGWSSVMSNVDFGLSVNSGETEATFVGPTGFSAKYTKNSAGAWVAPAGFNASL
SKGQFTWKLKYNKSGEAYDFDVTTKQLTYHTDRNGIGLTNDWTTSATTYTVKDTSGRFTR
VNHTTGSDPKITSIVDSANRTTTYTRNGSGQLTKIDKPGGAVTTMTYDTTGRLATMTVPS
APGTTTITFGYSTAHKVTKITQKSTSPTYGNKADVVTNFAYNSGNTVVTNPNGKASTYAY
DNQGRVTSTKDPLNRTRSQSWTANSDVQTSTDALGSGSTPGNETKNSYDGLNNATKTELP
TGAAASAVYSAGAGCASSGGDTFQVKCSTDASGNTASYDYDTAGNPTKKKDTTAGGTGAV
EFERVYDNWDSTICGGAPGQVCSAKDGNGNITRYAYDGMYNLAKVTPPAPQGATTYTYDA
LSRVTSVTDPRGKVTKYAYDVRDRQTLITFANGSTLAKTYYPNGLVQYDSDSFAGTKQFE
YDTLGRTTSQIGALAGLNQKYTYDAAGNILTFEDTSGITTNTYNAANELTSQREPGGVCP
TSGNPAANSGCTLFEYNGNGVETRRVFPAGAQMVTTLDKAGRTTQVQAKNAAGGVTADVA
YSFAKDGVDTLDIQTRTSGKEEGIPAGAVTAYQYDSQSRLTVAEEKAGGNTNAMWAYAYD
AAGNRTSQNRSGNTGGTQDTSIDYGYNAANQLTSTSADTTQWVYDAAGNQVKNGMTGVVA
TYGDRGQVQSIGATNFAAFGEGNTDTQSATGGRSFSNSILGLSRQTNTSASLVQNYSRTP
SGEAVGFRISSSHYYVTDLLGSVIGMFSGAGIWEGGYSYTPYGEERATSSNSAVALNSLR
YIGGYQESTNLYKMGARYYDASLGRFTQMDPSGQEPQPYAYAACNPVGNIDPSGLSCAGA
VAGFISAAGLLLITAGFALTTPVGAIATAITAGGLLLEGAGVWATWQEVKEECDL
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgttccacgcgttttccgccggcagaacgccggcaatatcaggtgcacgatcgcg
atgatcgcgacgagcgccgtcatgatcacggggctcggcgccatgccggcctccgccgag
acggccgcggggctggtgcagttcgaggaccagacgcaggaccctgcggtgatcaacaag
cagatgcaggacgaggcccagaaggccgcgaaggccgccgtctggacgccgggcacgatc
ccggccgagcccgccgacgccgacaagccggccccggagctgccccagtggaaggtcccg
aatccggaccgcaagctgggacaggccgtgtccacccagcgcgtccccgccggtacgccg
gtcggcgcaccgggcctcggcgcgctgccttacatgtccttcgaggacatctcgctctcc
gacgacaccgtcgcccgcgtgaacctcgcgaacggcaacctgctgctcaccgcgaacgac
ggcaccagctccgccgccggcatcggcgtccgcgccgaccgctactacaacggcctctcg
agctccgcgggcgccctcggcggcggctggtcctccgtcatgagcaacgtcgacttcggc
ctgtccgtgaacagcggcgagaccgaggcgacgttcgtcggaccgaccggcttctccgcg
aagtacaccaagaacagcgccggcgcgtgggtcgctcccgcgggcttcaacgcgtccctg
agcaagggccagttcacctggaagctcaagtacaacaagagcggggaggcgtacgacttc
gacgtcaccacgaagcagctgacctaccacaccgaccgcaacggcatcggcctcaccaac
gactggaccacgtccgccacgacctacacggtcaaggacacctccggccgcttcacgcgc
gtgaaccacaccactggatccgacccgaagatcacctcgatcgtcgactcggccaaccgc
accaccacgtacacgcggaacgggtccgggcagctgacgaagatcgacaagcccggcggc
gccgtcacgacgatgacgtacgacacgacgggtcgcctcgcgacgatgaccgtcccgtcc
gcccccggcacgacgacgatcacgttcggctacagcaccgcgcacaaggtcaccaagatc
acgcagaagtccacgtccccgacctacgggaacaaggccgacgtcgtgacgaacttcgcc
tacaacagcggcaacaccgtcgtcaccaacccgaacgggaaggcatcgacctacgcgtac
gacaaccagggccgcgtcacctcgaccaaggatccgctgaaccgcacccgctcgcagagc
tggaccgcgaacagcgacgtccagacctcgaccgatgcactcggctccggcagcacgccc
ggaaacgagaccaagaactcctacgacggcctgaacaacgccacgaagaccgagctgccc
accggcgccgcggcctccgcggtgtactcggccggtgccggttgcgcttcgagcggcggc
gacaccttccaggtgaagtgctccaccgacgccagcggcaacaccgccagctacgactac
gacaccgctggcaaccccaccaagaagaaggacaccaccgctggtggcaccggcgcggtc
gagttcgagcgcgtctacgacaactgggactccaccatctgcggtggcgctccgggccag
gtctgctccgccaaggacggcaacgggaacatcacccgctacgcctatgacggcatgtac
aacctcgccaaggtcacgccgcccgccccgcagggcgcgacgacgtacacgtacgacgcg
ctctcccgtgtcacgagcgtcaccgacccgcgcggcaaggtcacgaagtacgcctacgac
gtccgcgaccgccagacgctgatcacgttcgccaacggcagcacgctcgcgaagacgtac
tacccgaacgggctcgtccagtacgactccgacagcttcgccgggaccaagcagttcgag
tacgacaccctgggccgcaccaccagccagatcggtgctctcgccgggctgaaccagaag
tacacgtacgacgcggccggcaacatcctcactttcgaggacaccagcggcatcacgacc
aacacctacaacgccgccaacgagctcaccagccagcgcgagcccggcggtgtctgcccc
accagcggcaaccccgccgcgaacagcggatgcacgctgttcgagtacaacggcaatggc
gtggagacccgtcgcgtcttccccgccggcgcgcagatggtgaccaccctcgacaaggca
ggtcgcaccacccaggtgcaggccaagaacgccgccggcggcgtgaccgccgacgtcgcg
tattcgtttgcaaaggatggcgtggacacgcttgacattcagacccgcaccagcggcaag
gaagagggcatcccggccggcgcggtcaccgcgtaccagtacgactcgcagagccgcctc
acggtcgccgaggagaaggccggcggcaacaccaacgcgatgtgggcgtacgcctacgac
gccgcgggcaaccgcacgtcgcagaaccgctccggcaacaccggcggcacgcaggacacc
tcgatcgactacggctacaacgcggcgaaccagctcaccagcaccagcgccgacaccacc
cagtgggtctacgacgccgccggcaaccaggtcaagaacggcatgacgggtgtcgtcgcg
acctacggcgaccgcggacaggtccagagcatcggagcgacgaacttcgccgccttcggc
gagggaaacaccgacacccagagcgccacgggtggccgatccttctccaactcgatcctc
gggctctcgcggcagaccaacacgtccgccagcctcgtgcagaactacagccgcacgcct
tcaggcgaggcggtcggattccggatctcgtccagccactactacgtcaccgacctcctc
ggctccgtcatcggcatgttctccggtgcaggcatctgggagggcggctactcctacact
ccgtacggcgaggagcgcgcgacgtcaagcaacagcgcggtcgcgctgaactcgctgcgc
tacatcggcggctaccaggagtcgaccaatctctacaagatgggcgcacgctactatgac
gcctcgctgggccgcttcacgcagatggacccgtccggccaggaacctcagccgtacgca
tacgctgcatgcaaccccgttggtaacatcgatccgagcggcctcagctgcgccggagca
gtcgccggcttcatctcggccgcaggtctgctactgataacagcaggctttgcgcttacc
actcccgtcggtgctatcgccacggccatcaccgccggtggcctccttctcgaaggggct
ggcgtgtgggctacctggcaggaagtcaaggaagagtgtgatctatga
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