Clavibacter sepedonicus: CMS0065
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Entry
CMS0065 CDS
T00678
Name
(GenBank) putative GntR-family transcriptional regulator and oxidoreductase fusion protein
KO
K21061
D-hydroxyproline dehydrogenase subunit beta [EC:1.5.99.-]
Organism
cms
Clavibacter sepedonicus
Pathway
cms00470
D-Amino acid metabolism
cms01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cms00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CMS0065
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAO
FCD
GntR
Pyr_redox_2
NAD_binding_8
Pyr_redox
FAD_binding_3
FAD_oxidored
NAD_binding_7
FAD_binding_2
Thi4
HI0933_like
Pyr_redox_3
3HCDH_N
Rrf2
XdhC_C
HTH_11
AlaDh_PNT_C
MurD-like_N
Fe_dep_repress
AdoHcyase_NAD
ThiF
HTH_24
ApbA
TrkA_N
Epimerase
GIDA
UDPG_MGDP_dh_N
Trp_halogenase
Motif
Other DBs
NCBI-ProteinID:
CAQ00190
UniProt:
B0RHT2
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All DBs
Position
72898..74955
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AA seq
685 aa
AA seq
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MSLSALRPAPPRESLREHVHQALSAAIVSGELEPGTLITVPTLAVRFDVSATPVREAVLE
LEKRGFVETVRNKGFRVTAVSDEELGHLVQVRQLLEAPAMERLAGQLPDGALPGLEALAD
RIEQGARDGDLRAYLEADQEFHLSLTRMLGNPVLTDAIADLRSRTRLVGLASMKESSLLD
ASAAEHHELLRALVAGDGTAAHELMVRHIRHASGWWARRGRVGRGRGRRPGGSLRRLIRA
AVAAISHHGRCVTHYCHRPPPSPPPRGAPTRESRDTMTRHVVVVGGGIVGAACARSLARA
GIRVTVVERAAVASGTSAQGEGNILVSDKGPGAELELAQLAARRWPEVAAELADELGDAL
PSIEYEPKGGLVVTTTDEGADPLLAFAATQRSAGVQAVPVDRRRALELEPWLNPAITAAV
HYPEDAQVQPAIATEALAASARRAGAVVRTGVEVVGPILDADGALRGVRTSAGDIAADDV
LIAAGPWSGEVARALGVELPVLPRRGVVLVTTRMPHRIRHKVYDGDYVGAVGSGDGALQT
SGVVESTPSGTVLIGSSRERVGFDASLRVAVLEELAAKAVRLFPFLVEANAMRSYGGFRP
YLPDHLPVVGPDPRLPGLWHASGHEGAGIGLSVATADLIAAQMTGETTPLDVRPFSVARA
SLGLLMPGAAAPGAALPTAAAGVRA
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
gtgagcctctccgctctgcgtcccgcacccccgcgcgagagcctgcgcgagcacgtgcac
caggccctgtccgcggccatcgtctcgggcgagctggagccgggcacgctgatcaccgtg
cccacgctcgccgtgcgcttcgacgtctcggccacgcccgtccgcgaggcggtgctcgag
ctggagaagcgcgggttcgtcgagacggtccgcaacaaggggttccgcgtcacggccgtg
agcgacgaggagctcggccacctggtgcaggtgcgccagctcctcgaggcgccggccatg
gagcggctcgccgggcagctcccggacggcgcgctccccgggctcgaggcgctcgccgac
cggatcgagcagggcgcgcgcgacggcgacctccgcgcgtacctcgaggcggaccaggag
ttccacctgtcgctcacgcgcatgctcggcaaccccgtgctcaccgacgctatcgccgac
ctccgctcgcgcacccgtctcgtcgggctcgcgtcgatgaaggagagcagcctcctcgac
gcctcggccgccgagcaccacgagctcctgcgggcgctggtcgccggcgacgggaccgcg
gcgcacgagctgatggtgcggcacatccgccacgccagcgggtggtgggcgcggcgagga
cgagtcggccggggacgcgggcgccgtcccggtggatccctccgacgcctgatccgcgcg
gcggtcgctgccatttcccatcatgggcgatgtgtgacacattactgtcaccgcccacca
ccatcgccgcctcctcgaggcgcacccacccgtgagagcagggacaccatgacgcgtcac
gtggtcgtcgtgggcgggggcatcgtcggggccgcgtgcgcccggtcgctcgcccgggcg
gggatccgcgtcaccgtcgtcgagcgcgccgccgtcgcctccggcacgagcgcgcagggc
gagggcaacatcctcgtgtccgacaagggcccgggcgcggagctcgagctcgcgcagctg
gccgcccgccgctggcccgaggtcgccgcggagctcgcggacgagctgggcgacgcgctc
ccgtccatcgagtacgagcccaagggcgggctcgtcgtcacgaccaccgacgagggcgcg
gatccgctgctcgccttcgccgccacccagcgctccgcgggcgtccaggccgtgcccgtc
gaccgccgtcgggccctcgagctcgagccgtggctcaacccggcgatcaccgcggccgtg
cactaccccgaggacgcgcaggtgcagcccgccatcgcgacggaggcgctcgccgcgtcg
gcccggcgcgccggcgcggtcgtgcggacgggcgtcgaggtcgtcggcccgatcctcgac
gcggacggcgccctccgcggcgtgcggacgagcgcgggcgacatcgccgccgacgacgtg
ctgatcgccgcaggcccctggtcgggcgaggtggcccgcgcgctcggcgtcgagctgccc
gtgctgccgcggcgcggggtcgtgctcgtgaccacccgcatgccgcaccgcatccggcac
aaggtctacgacggcgactacgtgggcgcggtcggatccggcgacggcgcgctgcagacc
tcgggtgtcgtggagtcgacgccgtccgggaccgtgctcatcggatcgagccgcgagcgc
gtgggcttcgacgcgtcgctgcgcgtagcggtgctcgaggagctcgcggcgaaggccgtg
cggctcttccccttcctcgtggaggcgaacgcgatgcggtcctacggcggcttccgtccg
tacctacccgaccacctgccggtcgtcggcccggatccccggctgcccggcctctggcac
gcgagcgggcacgagggcgcggggatcggcctgtcggtcgcgaccgccgacctgatcgcc
gcgcagatgacgggcgagacgaccccgctcgacgtgcggcccttctccgtcgcgcgcgcg
tcgctcgggctgctgatgcccggggccgccgcgcccggcgccgcgctgccgaccgccgcc
gccggggtgcgcgcatga
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