Clavibacter sepedonicus: CMS0155
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Entry
CMS0155 CDS
T00678
Name
(GenBank) putative sortase sorted surface protein
Organism
cms
Clavibacter sepedonicus
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF8394
SpaA
Ig_J
MG_like
Motif
Other DBs
NCBI-ProteinID:
CAQ00279
UniProt:
B0RIG5
LinkDB
All DBs
Position
183661..187968
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AA seq
1435 aa
AA seq
DB search
MPSRRSRLATATAFGLAAAIVAFGGTAPANAAPGDTAEAEGRFLTLTNVPQVIALDGAYT
SYGPGDTAAQVENAPLDVDVLNGLANAQLAAGVTLGSLLDLDQAAGAGVLQQYASSGPAG
ATGAAGAVSDTGAIQVGQGAGQQTVIDLGSTIESIGAEGALSDLSLRFGAISSTTTSTGT
GTPTSDYDIASAEAVLTSPLVAQISSRLTAAVNGIAPEIAADIDVSAATGPLLEGILGEN
VLTAALEVGTPTVTATANVNTAAVVQAALAEPLTNADGTVSIDVSAGSITVDLDRIQALN
DRDPGASILTSAILADVVDSAITNIFTDVLPNRLVTALRASTTVDIAVTAPLTVGLLNTD
AGDLVVNVDVSLDRLLGGTTGTAPTVSLDGTNLIGIPVSLAVLTPLFDDLVTGLLGSNAD
TDLLPAIGDALAGVSTGVITALAPALAVVDQVVRLTVNEQTPDAFIDGDGVDAGSSSVTA
LRVRLLGNGGPTIDLARSTVRAVPAPVADDVTITSPTPDQVIELADGQTTVVVPVTGTAD
PDAEVTLTVGGQTVGPVEVGPGGTYTLTPTALPAGNYTATVTQTIDGQAAGSATVTFTIA
AAATDITITTPTADQVFLTTAADPTVDVPVEGAADVRASVTVTIPGQTAQTELVGADGLY
DVAFADLPVGTYTATATQTIDGVVRGTATVTFTVGAPAAAVTITSPSTGDQILSAGTVPT
ADVPVTGAADPRATVTVTIPGQDPQTELVGDDGVYDVTFADLPVGDYTATATQTIGGTAA
GSATVTFSVIAPAVAVVIDTPTDGQDFVVPAGGTAVPVTVSGSADVRGSVLIAVTGQTPV
TQVVGDDGRFEATFPGLSAAEYTVTVTQTIGGAAAGSDTADFTISVAGVDQVVILTPEDG
DFVPLPDGDTTVSVPVTGTADPDATVTLTVGDTTTAPAEVDDDGGFSLATPDLPSGTYTG
TVTQTIDGVAVGTDTVTFTIGVPVVIVSPFDFQVFPLTGGATTRDVPVSGTADPLGTITV
STLGLDPITTEVDADGNWTVTFFGLERGTYDVTATQTIGGAPAGEDTVTFDVGVDGGEGT
DSDADGSAAAVDVDGGGVDAAGTDATDSADAAGTDATDAAGTDATDAAGTDATDAAGTDA
TDAAGTDATDAAGTDAAGTDATDAAGADATDAAGADAADAAGTDATDAAGDNDADTDAAG
ADATDAAGADAADADGDNDADTDAAGADATDAAGADATDAAGTDATDAAGADATDAAGTD
ATDAAGTDAADATDGSTDGSDAPTRAVVRFTEIVRGSGSMQMVDASGFIPGETLNATVFS
TPKPLAPMIADADGRATFVFEIGPDFEMGDHRVEVSGVQSGMADEMDTRFRVLGSTVPAG
QPGTPISGGNGGGYGGGILPVTGGDADGMLLLGGIALLMMLTGAGALHRGRSRRA
NT seq
4308 nt
NT seq
+upstream
nt +downstream
nt
atgcccagccgcagaagcaggctggcgaccgcgacggccttcgggctcgccgcggcgatc
gtcgcgttcgggggcaccgcgcccgcgaacgccgcaccgggggacacggcggaggccgaa
gggcgcttcctgaccctcacgaacgtcccgcaggtgatcgccctcgatggcgcgtacacc
tcctacggacccggcgacaccgccgcgcaggtggagaacgcgccgctggacgtggacgtc
ctgaacgggctcgcgaacgcgcagctcgccgccggcgtcacgctcggctcgctcctcgac
ctggaccaggccgcgggtgcgggcgtcctccagcagtacgcctcgagcggaccggccgga
gcgacgggcgcggccggcgccgtgtccgacaccggcgccatccaggtcggccagggcgcc
ggacagcagacggtcatcgatctcggctcgaccatcgagtccatcggtgccgagggcgcc
ctctccgatctgtcgctgcggttcggggccatctcctccaccaccacgtcgacggggacg
gggacgccgacgtcggactacgacatcgcctcggccgaggccgtgctcacgagcccgctg
gtcgcgcagatcagctcccggctcacggcggccgtcaacgggatcgcccccgagatcgcc
gccgacatcgacgtctcggccgcaacgggcccgctcctcgaggggatcctcggggagaac
gtcctcaccgcggccctcgaggtcgggacccccacggtcaccgccacggcgaacgtgaac
acggcggccgtcgtgcaggccgcgctcgccgagccgctcacgaacgccgacgggacggtc
tcgatcgacgtgtccgccggctccatcacggtggatctcgaccggatccaggcgctcaac
gaccgggatcccggagcgtcgatcctgacctcggccattctcgcggacgtcgtcgactcg
gcgatcacgaacatcttcacggacgtgctgccgaaccgcctcgtgaccgcgctccgcgcc
tccaccacggtggacatcgcggtcaccgcgccgctcacggtcggcctgctcaacacggac
gcgggtgatctcgtcgtcaacgtcgacgtgtcgctcgaccgcctcctcggcgggacgacc
ggcacggcccccacggtgagcctcgatgggacgaacctcatcggcatcccggtgtccctg
gcggtcctcacgccgctcttcgatgacctggtgaccgggctcctcgggtcgaacgccgac
acggatctcctgccggccatcggcgacgcgcttgccggcgtcagcacgggcgtgatcacg
gcactcgcgccggcgctcgcggtcgtcgaccaggtcgtgcgcctcacggtcaacgagcag
acgccggacgccttcatcgacggggacggcgtggacgccggatcctcgtcggtgacggcc
ctgcgcgtgcggctgctcgggaacggagggccgaccatcgacctggcccgctccaccgta
cgcgccgtgcccgcccccgtcgccgacgacgtgaccatcacgtcgccgacgccggaccag
gtgatcgagctggccgacgggcagacgaccgtggtcgtccccgtcaccggcaccgccgat
ccggacgccgaggtcacgctgaccgtcggcggccagacggtcggtccggtcgaggtcgga
cccggtggcacctacacgctcacaccgaccgccctcccggccggcaactacacggccacc
gtcacccagacgatcgacgggcaggccgcgggctccgcgacggtgacctttaccatcgcg
gcggcggccacggacatcacgatcacgacgcccacggcggaccaggtcttcctgaccacc
gcggcggacccgacggtcgacgtgcccgtggagggcgcggccgacgtgcgcgcctcggtc
accgtgacgatccccggccagaccgcgcagaccgagctggtcggcgccgacggcctctac
gacgtggcgttcgccgacctcccggtcggcacgtacacggcgaccgccacccagacgatc
gacggcgtggtccgcgggacggcgacggtgaccttcacggtcggcgcccccgccgccgcg
gtgacgatcacgtctccgtcgaccggtgaccagatcctcagcgccggcaccgtgccgacg
gccgacgtccccgtgaccggcgccgccgacccgcgcgccaccgtcacggtgacgatcccc
ggccaggacccgcagacggagctcgtcggcgacgacggggtctacgacgtgacattcgcc
gacctcccggtcggcgactacacggcgacggcgacccagacgatcggcggcaccgccgca
ggatcggccacggtcaccttctccgtcatcgccccggcggtcgccgtggtcatcgacacc
ccgaccgacgggcaggacttcgtcgtcccggccggcggcaccgcggtgcccgtgaccgtg
agcggcagcgccgacgtccgcggatccgtgctcatcgcggtcacgggccagacgcccgtc
acgcaggtggtcggggacgacggccgcttcgaggcgacgttccccggtctctccgccgcg
gagtacaccgtcacggtgacgcagaccatcggcggcgctgctgccggttcggacacggcc
gacttcaccatctccgtggccggcgtcgaccaggtcgtcatcctgacgcccgaagacggc
gacttcgtgccgctgcccgacggcgacaccaccgtctccgtcccggtgacgggcacggcc
gaccccgacgccaccgtcacgctgacggtcggcgacacgacgacggctccggcggaggtg
gacgacgacggcggcttctcgctggcgacgcccgatctgccctccggcacctacacgggc
accgtcacgcagacgatcgacggcgtcgccgtcggcaccgacaccgtgaccttcacgatc
ggcgtgccggtggtcatcgtctcgccgttcgacttccaggtcttcccgctcaccggcggg
gcgaccacgcgtgacgtaccggtctccggcacggccgacccgctggggacgatcacggtc
tcgaccctgggtctcgacccgatcacgacggaggtggacgccgacggaaactggacggtg
acgttcttcggcctggagcgcggcacgtacgacgtgaccgcgacgcagaccatcggcggc
gcccctgccggcgaggacacggtcacgttcgacgtgggcgtggacggcggcgagggcacc
gactccgatgccgacggatccgcggccgcggtggacgtggacggtggcggcgttgacgcc
gccggcacggatgcgacggattcggcggatgctgcgggaacggatgcgaccgatgccgca
ggcaccgatgcgacggatgctgcgggaacggatgcgaccgatgccgcaggcaccgatgcg
acggatgctgcgggaacggatgcgacggacgccgctggcaccgatgcagccggaaccgac
gcgaccgatgctgctggcgctgacgcgacggatgctgctggcgccgacgcggcggatgct
gccggtacggatgcgacggatgctgctggcgacaacgatgcggacactgatgccgctggc
gctgatgcgacggatgctgctggcgctgacgcggcggatgccgatggcgacaacgatgcg
gacactgatgccgctggcgctgatgcgacggatgctgctggtgctgacgcgacggatgcc
gctggtaccgatgcgaccgacgccgctggcgccgacgcgaccgacgctgccggtaccgac
gcgacggacgccgctggcacggacgcggccgacgccaccgacggatccaccgacggcagc
gacgcccccacccgggccgtcgtccgcttcacggagatcgtccgtggcagcggctcgatg
cagatggtcgacgcctccggcttcatccccggtgagacgctcaacgcgacggtgttctcc
acgccgaagccgctggcgccgatgatcgcggacgccgatggacgtgcgacgttcgtgttc
gagatcggtccggacttcgagatgggggaccaccgcgtcgaggtgagcggagtccagtcc
ggcatggccgacgagatggacacgcgattccgggtcctcggatccaccgtcccggcgggc
cagcccggcacgccgatcagcggcggcaacggcggcggatacggcggcggcatcctcccg
gtcacgggcggcgacgccgacgggatgctgctgctcggcggcatcgcgctcctgatgatg
ctgaccggcgccggtgccctgcaccgaggccgcagccgacgggcgtga
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