Clavibacter sepedonicus: CMS0158
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Entry
CMS0158 CDS
T00678
Name
(GenBank) DNA polymerase III subunit gamma
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
cms
Clavibacter sepedonicus
Pathway
cms03030
DNA replication
cms03430
Mismatch repair
cms03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cms00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CMS0158
03430 Mismatch repair
CMS0158
03440 Homologous recombination
CMS0158
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cms03032
]
CMS0158
03400 DNA repair and recombination proteins [BR:
cms03400
]
CMS0158
Enzymes [BR:
cms01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CMS0158
DNA replication proteins [BR:
cms03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CMS0158
DNA repair and recombination proteins [BR:
cms03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CMS0158
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
DNAX_ATPase_lid
AAA_22
RuvB_N
DnaX_C
Rad17
AAA_14
AAA_30
nSTAND3
AAA_19
AAA_28
AAA_16
TFA2_Winged_2
AAA_18
ORC-CDC6-like
Motif
Other DBs
NCBI-ProteinID:
CAQ00282
UniProt:
B0RIG8
LinkDB
All DBs
Position
190326..192839
Genome browser
AA seq
837 aa
AA seq
DB search
MPGILRTVVTALYRRYRPENFAELIGQTQVTDPLRTALRTNRVNHAYLFSGPRGCGKTTS
ARILARCLNCAEGPTDTPCGVCPSCVELSRDGSGSLDVVEIDAASHNGVDDARDIRERAV
FAPARDRYKIFILDEAHMVTPQGFNALLKIVEEPPEHVKFIFATTEPDKVIGTIRSRTHH
YPFRLVPPAQMLDYVEHLSREESVQVAPGVLPLVVRAGGGSVRDTLSLLDQLIAGSEDES
VEYERAVALLGYTHAALLDEVIDAIARHDAAAAFAGVDRVIQTGQDPRRFVEDLLERLRD
LIIVGATSVEGAAAVLRGTPEDELERMRAQAVAFGAVELSRAADVVNAALTEMTGATSPR
LHLELLVARVLVPASDDTHRGALARVERLERRVGVADAGADPAPATPVAAAAPAAAPAPA
SAPAPAATSAPVAAPDPAPTPDPAPAAKSTETGATTQTPAASAPDESSPSSSGTGAPAAE
APSAPAPTAPVGPVTFEQLRDSWPSVVEAVEKAKRSAWLVAVTATPRALTDDVLTLSFVS
ANDAERFKERGAPGQGVSDILRTAILDVLGIRVKFIARVEPHGGSAAPTGTSAPTGGGSA
SPAPDASRPAASAPSSAPTRPKGGNAATTSAPATPPASSASTAKTAPAAGTAPAAGSASP
AKTTPAGGGWATVAIPTSDPGASEAPAVRAPASRPERSANAGPATAPTASAAAPRASTPS
APARGSSVVPDAHVPDFEEPEPDEFGPAEPGWATGGASPDSAPPVARSAPAQQPPAASGP
ASRPDTAPAAPAKAAPPAAAPQRYGESVVREILQASFIEEKPIERKARPTIRPTGQD
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
gtgcccggtatcctcaggaccgtggtcaccgccctgtatcgccgttatcggccagagaac
ttcgccgagctcatcggccagacgcaggtgacggatccgctgcgcaccgccctccgcacc
aaccgcgtcaaccacgcgtacctcttcagcggcccgcgcggctgcggcaagaccacgtcg
gcccgcatcctcgcccgctgcctcaactgcgccgagggccccaccgacaccccgtgcggc
gtctgccccagctgcgtcgagctcagccgcgacggcagcggatccctcgacgtggtcgag
atcgacgccgcgagccacaacggcgtagacgacgcccgcgacatccgggagcgcgcggtc
ttcgcgccggcgcgcgaccgctacaagatcttcatcctcgacgaggcccacatggtcacg
ccgcagggcttcaacgccctgctgaagatcgtggaggagccgccggagcacgtgaagttc
atcttcgccaccacggagcccgacaaggtcatcggcaccatccgctcccgtacgcaccac
tacccgttccggctcgtgccgcccgcgcagatgctcgactacgtggagcacctgtcgcgc
gaggagagcgtgcaggtcgcgcccggcgtcctgccgctcgtcgtccgcgccggcggggga
tccgtgcgcgacacgctctccctgctcgaccagctcatcgccgggtcggaggacgagagc
gtggagtacgagcgcgccgtcgcgctcctcggctacacgcacgcggcgctgctcgacgag
gtcatcgacgcgatcgcccgccacgacgcggccgccgccttcgcgggggtcgaccgggtc
atccagaccggccaggatccgcggcgcttcgtggaggacctgctcgagcgcctgcgcgac
ctcatcatcgtgggcgccacctccgtcgagggcgccgccgccgtgctgcgcggcaccccg
gaggacgagctcgagcgcatgcgcgcccaggccgtggccttcggcgccgtcgagctgtcc
cgtgcagccgacgtggtcaacgccgccctcaccgagatgaccggcgccacctcgccgcgc
ctccacctcgagctgctggtggcgcgcgtgctcgtgcccgcgagcgacgacacgcaccgc
ggcgccctcgcccgggtcgagcgcctcgagcgccgggtcggcgtggccgacgcgggggcg
gatccggcgcccgccacgcccgtcgccgcagctgcgccggcagcagctcccgcgcccgca
tcggctcccgctcccgccgccacgtcggctcccgtcgccgctcccgatccggccccgact
cccgatccggcccccgcggcgaagtcgacggagaccggtgccaccacccagaccccggcc
gcatccgctcccgacgagtcctccccgtcgtcgtccgggacgggcgcccccgcggcggag
gcgccctccgcgcccgcgccgaccgcgcccgtcgggccggtcaccttcgagcagctgcgc
gactcctggccgtcggtcgtcgaggcggtcgagaaggccaagcgcagcgcctggctcgtc
gccgtcaccgcgacgccgcgcgcgctcacggacgacgtgctcacgctgtccttcgtcagc
gccaacgacgcggagcggttcaaggagcgcggcgcacccgggcagggcgtgagcgacatc
ctgcgcaccgccatcctcgacgtgctcggcatccgcgtgaagttcattgcgcgcgtcgag
ccgcacggcggcagcgccgcccccacgggcacctcggctccgaccggcggcggatccgcg
tcgcccgcgcccgacgcctcccgcccggcggcgtccgcaccgtcgtcggctcccacgcgc
ccgaagggcgggaacgccgccaccacgtccgccccggcgactccgcccgcgtcatcggcc
tcgaccgcgaagacggcaccggccgcggggacggcaccggccgcggggtcggcgtcgcct
gcgaagaccacgccggccggtggcggctgggccaccgtcgccatccccacgtccgacccc
ggcgcgtccgaggcgcctgccgtccgggcccccgcctcccgtcccgagcgctccgcgaac
gccggccccgcgaccgcgccgacggcatccgcggccgccccgcgcgcctcgaccccgagc
gcgcccgcccgcggatcctcggtggtgccggacgcgcacgtccccgacttcgaggagccc
gagcccgacgagttcggccccgcggagcccggctgggccaccggcggcgcgtctcccgac
tcggccccgcccgtcgcccgatccgcccccgcgcagcagccgccagccgcatccggtccc
gcctcacggccggacaccgctcccgcagcccccgccaaggccgcgcctccggccgccgcg
ccgcagcgctacggcgagtccgtcgtccgcgagatcctgcaggcgagcttcatcgaggag
aagcccatcgagcggaaggcccgccccaccatccgccccacaggtcaggactag
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