Clavibacter sepedonicus: CMS0178
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Entry
CMS0178 CDS
T00678
Name
(GenBank) putative penicillin-binding protein/transpeptidase
Organism
cms
Clavibacter sepedonicus
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
PASTA
Transpeptidase
DUF4888
Motif
Other DBs
NCBI-ProteinID:
CAQ00301
UniProt:
B0RII6
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All DBs
Position
complement(213766..216306)
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AA seq
846 aa
AA seq
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MSASKNTPGRVAAALTGVLGMSAVAGVLVAAMVTPAIAVTSLAANNTIGLFEDLPDYLQI
DNLAQKTELYATQGGQPVKFAEFYAQNRQEVSWDEVSDNAKAAAVDTEDPRFYEHGGVDV
QSTFRALAQNVIGGGVESGASTITMQYVKNVLVQKAETLAETDPDAGKKAYAEATQESTA
RKLKEMRLAIGLEKKFAKNDILLGYLNIANYGGSVYGIQSAAKYYYNVDAKDLSIAQAAS
LVATVNYPTALRIDEPGNVKANQERRDILIDNMLKHHSITQQQHDEAIATPVTPAITPSV
SGCNAAQPASAAYFCDAVKYTVENSKEFGASPDEARRNLNRNGYKIYTTLNLDLQAKATD
DMRKQIPTTMNSIPELGSAMTSVEAKTGRVIAMVQNTDYGNNAGAGVQSVNFNTDQDMGG
SRGFQVGSTYKLVTLLEWLKEGHSVNEVVNSSKGTWSGSDFRDSCTGGTLSSKPLVVTND
GAAPGANRTVMSGTANSTNTAFMAMASELDMCGIVQTAKDIGIHQADKSKPLSGLVSDII
GSGGNNIAPLTMASAYATVANNGTTCTPILIDKVVLPDDTEVTPPSANCTETVSPDVAHT
AAYALAGVMGATGAAANTNDGTPLIGKTGTTDRAKDTWFVGSSSEVTTAIWVGSYGGQDI
RQRTTNLPNGQLMSTARFAVWKPFMQSVNAVYKGSAFPGPAADLTRTPTVQVPDVSGMSP
ADAQSAIEGAGLSFAQGGARASSVSAGQVAGSDPGAGANAARGSTVTVFISSGPGQSLQQ
GTPGTVPDVRGQDMTSARQTLRAAGFDVTMAQEQVQDNSQIGKATRTDPAAGQQSGGPVT
LYIGRS
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcttccaagaacacgcccggccgcgtcgccgccgcgctcacgggtgtcctcggc
atgagcgccgtggccggcgtgctggtcgccgcgatggtcacccccgccatcgccgtcacg
agcctggccgccaacaacacgatcggcctcttcgaggacctgccggactacctgcagatc
gacaacctcgcccagaagaccgagctgtacgccacgcagggcggccagccggtcaagttc
gccgagttctacgcgcagaaccgccaggaggtgagctgggacgaggtctccgacaacgcg
aaggccgcagccgtcgacacggaggacccccgcttctacgagcacggcggcgtcgacgtg
cagtccacgttccgcgcgctcgcccagaacgtcatcggcggcggcgtcgagtcgggcgcg
agcaccatcaccatgcagtacgtgaagaacgtgctcgtgcagaaggcggagacgctcgcc
gagacggatcccgacgccgggaagaaggcgtacgcggaggcgacgcaggagtcgaccgcc
cgcaagctcaaggagatgcggctcgcgatcgggctggagaagaagttcgcgaagaacgac
atcctgctcggctacctcaacatcgcgaactacggcggcagcgtctacggcatccagtcg
gccgcgaagtactactacaacgtcgacgccaaggacctgagcatcgcccaggcggcgagc
ctcgtcgcgacggtgaactacccgaccgccctgcggatcgacgagccggggaacgtcaag
gcgaaccaggagcgccgcgacatcctcatcgacaacatgctcaagcaccacagcatcacg
cagcagcagcacgacgaggcgatcgccacccccgtgacaccggcgatcacgccctcggtc
agcggctgcaacgccgcgcagcccgccagcgccgcgtacttctgcgacgcggtgaagtac
accgtcgagaactccaaggaattcggtgccagtcccgacgaggcccgccgcaacctcaac
cgcaacggctacaagatctacacgacgctgaacctcgacctgcaggccaaggccacggac
gacatgcgcaagcagatccccacgacgatgaacagcatcccggagctcggatcggcgatg
acgagcgtggaagcgaagaccggtcgcgtcatcgccatggtccagaacaccgactacggc
aacaacgcgggcgccggtgtgcagagcgtcaacttcaacaccgaccaggacatgggcggg
tcacggggattccaggtgggatcgacgtacaagctcgtcaccctgctcgagtggctcaag
gaggggcactcggtcaacgaggtcgtcaactcctccaaggggacgtggtccgggagcgac
ttccgggattcctgcacaggtgggactctcagctcgaagccgctggtcgtcacgaacgac
ggcgcggctccgggcgcgaatcgcactgtgatgtcaggcacggcgaactcgaccaacacc
gcgttcatggccatggcgtcagagctcgacatgtgcggcatcgtgcagaccgcgaaggac
atcgggatccaccaggcggacaagagcaagccgctctccggtctcgtctccgacatcatc
ggttccggtggcaacaacatcgcacccctcacgatggcctcggcttacgccacggtcgcg
aacaacgggaccacgtgcacgccgatcctgatcgacaaggtcgtgctccccgatgacacc
gaggtcacaccgccgtcggcgaattgcacggagaccgtcagcccggatgtcgcccacacg
gccgcgtacgcgctcgcgggtgtcatgggcgccaccggtgccgccgccaacacgaacgac
ggaacgccgctcatcggcaagacgggcaccacggatcgcgccaaggacacctggttcgtc
ggatccagcagcgaggtcaccaccgcgatctgggtggggagctacggcggacaggacatc
cgccagcgcaccaccaatctcccgaacggccagctcatgtccaccgcccgcttcgccgtg
tggaagccgttcatgcagtccgtgaacgcggtctacaagggatcggccttccccggcccg
gcagcggacctcacccgcacgccgacggtccaggtgccggacgtgtcgggcatgtcgccc
gctgacgcccagtcggccatcgagggagcgggcctgtccttcgcccagggcggcgcgcgc
gcctcctccgtatccgccggccaggtcgccggatccgacccgggcgccggcgccaacgcc
gcgcgcggatccaccgtcacggtcttcatcagcagcgggcccggccagagcctgcagcag
ggcaccccgggcaccgtcccggacgtgcgcggtcaggacatgacgagcgctcgccagacc
ctgcgcgcggccggcttcgacgtgaccatggcgcaggagcaggtgcaggacaactcgcag
atcggcaaggcgacccgaacggatcccgccgccggccagcagagcggcggccccgtgacg
ctctacatcggacgcagctga
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