Clavibacter sepedonicus: CMS0189
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Entry
CMS0189 CDS
T00678
Name
(GenBank) putative DNA polymerase
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
cms
Clavibacter sepedonicus
Pathway
cms03030
DNA replication
cms03430
Mismatch repair
cms03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cms00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CMS0189
03430 Mismatch repair
CMS0189
03440 Homologous recombination
CMS0189
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cms03032
]
CMS0189
03400 DNA repair and recombination proteins [BR:
cms03400
]
CMS0189
Enzymes [BR:
cms01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CMS0189
DNA replication proteins [BR:
cms03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CMS0189
DNA repair and recombination proteins [BR:
cms03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CMS0189
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
AAA_16
AAA_11
Mg_chelatase
nSTAND3
AAA_5
RNA_helicase
AAA_29
Motif
Other DBs
NCBI-ProteinID:
CAQ00312
UniProt:
B0RAE4
LinkDB
All DBs
Position
226968..228227
Genome browser
AA seq
419 aa
AA seq
DB search
MSDAETDRAAATQAAVARGDATPASPDGRAIWDELTGQSEAVALLAAASSPRATARDAAG
TALAHSWLITGPPGSGRSNLAYAFATALLSDGTPEGDAATSRQVAARSHPDLGVLATERV
IIAIDEVRALVTSSQYSPSVGRYRVMVIEDADRMTERTSNLLLKALEEPPERTIWILCAP
SEADLIPTIRSRVRSVRLRIPSVEDVAALIQRRDGVDEAVALRAAREAQSHIGMAHRLAT
DAEARERRSRTLELALGIRTVGDAVRAAAAMLELAGQDAKAFTVQRDADERERALRSLGV
QEGGSIPPQLRSQIRQLEEDQKRRATRSLRDGIDRILVDLMSLHRDVLLNQLGADLPQVN
AAIAPRIAEAAEAGSAAASLAVLDAVGVARRRIDGNVSPALALEAMLVSITRTRTAGRA
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgacgcggagaccgaccgcgccgccgcgacgcaggccgccgttgcccggggagac
gcgacgcccgcgagccccgacggccgcgcgatctgggacgagctcaccggccagtccgag
gccgtcgcgctcctcgccgccgccagcagcccgcgggccaccgcgcgtgacgccgccggc
acggcgctggcgcattcgtggctcatcaccgggccccccgggtccggccgctcgaacctc
gcctacgccttcgcgaccgcgctgctcagcgacggcacgccggagggggacgcggcgaca
tcccgccaggtcgcggcccgcagccaccccgacctcggcgtgctcgccaccgagcgggtc
atcatcgccatcgacgaggtgcgcgcgctcgtcacctcgtcgcagtactcgccgtcggtc
ggccgctaccgggtcatggtcatcgaggacgccgaccggatgaccgagcgcacgtcgaac
ctgctgctgaaggcgctcgaggagccgccggagcgcaccatctggatcctctgcgcgccc
agcgaggccgacctcatccccaccatccgctcacgcgtccgcagcgtgcggctgcgcatc
ccgtccgtcgaggacgtggccgcgctcatccagcgacgcgacggcgtcgacgaggccgtc
gcgctgcgggccgcccgcgaggcgcagagccacatcggcatggcgcaccggctcgcgacc
gacgctgaggcgcgtgagcgccgcagccgcaccttggagctcgcgctcggcatccgcacg
gtcggcgacgccgtgcgcgcggccgccgcgatgctcgagctggccggccaggatgccaag
gccttcacggtgcagcgcgacgccgacgagcgcgagcgggcgctccggtcgctcggcgtg
caggagggcgggtccatcccgccgcagctgcgctcgcagatccggcagctcgaggaggac
cagaagcggcgcgcgacgcggagcctccgggacggcatcgaccggatcctcgtcgacctc
atgtccctgcaccgcgacgtgctcctgaaccagttgggggcggacctgccccaagtcaac
gcggcgatcgccccgcggatcgccgaggccgccgaggccggatccgcggcggcgtcgctg
gcggtcctcgatgcggtgggcgtggcgcgtcgtcggatcgacggcaacgtgtcgccggcg
ctcgccctggaggcgatgctcgtctccatcacccgcacgcgcacggcgggtcgggcgtga
DBGET
integrated database retrieval system
