Clavibacter sepedonicus: CMS0281
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Entry
CMS0281 CDS
T00678
Name
(GenBank) conserved hypothetical protein
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
cms
Clavibacter sepedonicus
Brite
KEGG Orthology (KO) [BR:
cms00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cms03032
]
CMS0281
03400 DNA repair and recombination proteins [BR:
cms03400
]
CMS0281
Enzymes [BR:
cms01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CMS0281
DNA replication proteins [BR:
cms03032
]
Prokaryotic type
DNA Topoisomerases
CMS0281
DNA repair and recombination proteins [BR:
cms03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CMS0281
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
DUF4982
Motif
Other DBs
NCBI-ProteinID:
CAQ00402
UniProt:
B0RB37
LinkDB
All DBs
Position
323961..324929
Genome browser
AA seq
322 aa
AA seq
DB search
MVRLRRSDATGKGYTRKRAGRGWTYLDAQGNRVTDRVLRARMEKLGIPPAWTDVWIAPYE
NGHVQATGMDSAGRRQYIYHPTWREQKDRIKFDRALQLAESLPAARRQVTIHLRQDGFTR
DRALAAGFRMLDTGSLRVGSERYTESNGSHGLSTLLCSHVAIHGETVHLEFPAKSGQEWS
SDIKDADLVKVIRGLKRRGPNARLLAYRDGDVWHPLGAADINAYVQERTGGEFTAKDFRT
LHGTVAAAISLAKHGPEDAKGKRQRALAQAYRDAAEVLSNTPTIAKNSYVNPRLVDEYGH
GRTIDPQRLASGETELRNLLFR
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atggtcagactccggcgcagcgacgccaccggcaagggctacacccgcaagcgagcaggc
cggggctggacctacctcgacgcgcaggggaaccgggtcaccgacagggtgctccgcgcc
cgcatggagaagctcgggatcccgccggcgtggaccgacgtctggatcgcgccgtacgag
aacggccacgtgcaggcgacgggcatggacagcgccggccgccggcagtacatctaccac
ccgacctggcgcgagcagaaggaccggatcaagttcgaccgcgcgctgcagctcgccgag
tcgctgcccgcggcacggcggcaggtgacgatccacctgcgccaggatggtttcacccgg
gaccgcgccctcgccgcggggttccggatgctcgacaccggcagcctccgcgtgggcagc
gagcggtacaccgagtccaatggcagccacgggctctcgacgctgctgtgctcgcacgtc
gccatccacggcgagaccgtccacctcgagttccccgcgaagagcgggcaggagtggtcg
agcgacatcaaggacgccgacctcgtgaaggtcatccggggtctcaagcgccgcggcccg
aacgcgcgcctgctggcgtacagggacggcgacgtctggcatccgctgggcgccgcggac
atcaacgcgtacgtccaggagcgcacgggcggcgagttcacggcgaaggacttccgcacg
ctgcacggcaccgtcgccgcggcgatcagcctcgccaagcacgggcccgaggacgccaag
ggcaagcggcagcgggcgctcgcgcaggcgtaccgcgacgccgcggaggtgctcagcaac
acccctaccatcgcgaagaacagctacgtgaatccgcgcctcgtcgacgagtacgggcac
ggccgcacgatcgacccgcagcgcctcgcgtcgggcgagacggagctgcggaacctgctg
ttccggtga
DBGET
integrated database retrieval system
