Clavibacter sepedonicus: CMS0305
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Entry
CMS0305 CDS
T00678
Symbol
licR
Name
(GenBank) putative PTS system antitermination regulator
KO
K03491
probable licABCH operon transcriptional regulator
Organism
cms
Clavibacter sepedonicus
Brite
KEGG Orthology (KO) [BR:
cms00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cms03000
]
CMS0305 (licR)
Transcription factors [BR:
cms03000
]
Prokaryotic type
Other transcription factors
BglG family
CMS0305 (licR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PTS_EIIA_2
PRD
HTH_11
HTH_Mga
HTH_IclR
Mga
MerR
Motif
Other DBs
NCBI-ProteinID:
CAQ00426
UniProt:
B0RB61
LinkDB
All DBs
Position
complement(337920..339899)
Genome browser
AA seq
659 aa
AA seq
DB search
MLSENQERLLDYLSTADRWVEAGELADRLGVTTRSVRNYVTAVRERSTVAIASSPDGYRI
DAGSYARHLGTRSGADQQGTPRDRLHALVRRLGDAPDGLDVFALADELHVSESTVEADLR
KVRALVEDAGLALRRTGSIAVLEGSERDFRRLLSRMFRDESAQGFLPLETVQREFASDSL
RAFKTDLVRELTEGGFFVNEYGVDNVLLHVAIAVDRLARSPRRTDAGADPSAGADLDPAP
AADDAAEGPAAADPTALAIRAVLARLLAAHFDVPVPAGDVAYLALLVRTRVVTPGNEQSL
ATVMREHVVESDLDVVRAIVRRVKQEYLVDLEDEDFTVRFSLHLGNLVARAADRSFSRNP
LARSIKTSYPMTYEIAVFIASEVQRRRGIAINDDEIAYIALHVGSHRERIARRDDRVACA
LVCPNYYDLHQIMRQRIEQALGADISVDAVVTRTDVDADALGVQLVINATGTRPPGDDVV
VVQPLPTPDDIESIRQAVARVRRHARRSSMKHDLLRFLDESLFFRDLHAPDEEAMIRLLG
GKMVEQGIIEPEYIDGAIERERLSSTAFTDTLAVPHSLAMTAHRTAIAIVVNDEAMQWGG
NRVHVVALVAFSASGRTSFQHVFDQFVEVFSDHRDVQAIMRASGSHGSFIEELVHVMDT
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgctgagcgagaaccaggagcggctgctggactacctgtccacggccgaccgctgggtc
gaggccggcgagctcgcggaccgcctcggggtcaccacgcgcagcgtgcgcaactacgtc
accgccgtgcgggagcgttcgaccgtggccatcgcctcctcccccgacggctaccggatc
gacgccggcagctacgcccgccacctcgggacgcgctcgggcgccgaccagcagggcacg
ccccgcgaccgcctgcacgcgctcgtccgccgcctcggcgacgcgcccgacggcctcgac
gtcttcgcgctcgcggacgagctgcacgtgagcgagtccaccgtcgaggcggacctccgc
aaggtgcgcgcgctcgtcgaggacgccgggctcgccctccgccgcaccggatccatcgcc
gtcctcgagggatccgagcgcgacttccgccggctgctgtcgcgcatgttccgcgacgag
agcgcgcagggcttcctgccgctcgagacggtgcagcgggagttcgcctccgactcgctg
cgcgcgttcaagacggacctcgtccgcgagctcaccgagggcggcttcttcgtcaacgag
tacggcgtcgacaacgtgctgctgcacgtggcgatcgcggtcgaccggctcgcgcggtcg
ccgcggcggacggacgccggcgcggatccgtccgcgggcgccgacctcgaccccgcgccg
gccgccgacgacgcggccgagggacctgccgccgccgaccccaccgccctcgcgatccgc
gccgtgctcgcccgcctgctcgccgcccacttcgacgtgcccgtgcccgccggcgacgtc
gcctacctcgcgctcctcgtgcgcacgcgcgtcgtcacgcccggcaacgagcagtcgctg
gcgaccgtgatgcgcgagcacgtcgtcgagagcgacctcgacgtggtgcgcgccatcgtc
cgccgcgtgaagcaggagtacctggtggacctcgaggacgaggacttcacggtgcgcttc
tccctgcacctcggcaacctcgtggcccgcgccgccgaccgctccttctcccgcaacccg
ctcgcgcgctccatcaagacctcctacccgatgacgtacgagatcgcggtgttcatcgcg
agcgaggtgcagcggcgacgcgggatcgcgatcaacgacgacgagatcgcgtacatcgcc
ctgcacgtgggctcgcaccgggagcgcatcgcccgacgcgacgaccgggtcgcgtgcgcg
ctcgtctgcccgaactactacgacctgcaccagatcatgcggcagcgcatcgagcaggcg
ctgggcgccgatatcagcgtggacgccgtcgtcacgcgcaccgacgtcgacgcggacgcc
ctcggggtgcagctcgtgatcaacgccaccggcacgcgtccgcccggcgacgacgtcgtg
gtcgtccagccgctgccgacgcccgacgacatcgagtcgatccgccaggccgtcgcccgc
gtccgccggcacgcgcgccggagctccatgaagcacgacctgctgcgcttcctcgacgag
tcgctgttcttccgcgacctgcacgcgcccgacgaggaggcgatgatccggctgctcggc
ggcaagatggtggagcagggcatcatcgagcccgagtacatcgacggggccatcgagcgc
gagcgcctctcgtcgaccgcgttcaccgacacgctcgccgtgccgcactcgctcgcgatg
acggcgcatcgcacggccatcgcgatcgtggtcaacgacgaggcgatgcagtggggcggc
aaccgcgtgcacgtggtcgcgctcgtcgccttcagcgcgagcggccgcacgagcttccag
cacgtcttcgaccagttcgtcgaggtcttctccgaccaccgcgacgtgcaggccatcatg
cgggcgtcgggatcgcacggctccttcatcgaggagctcgtgcacgtcatggacacctga
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