Clavibacter sepedonicus: CMS0316
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Entry
CMS0316 CDS
T00678
Name
(GenBank) DNA-directed RNA polymerase alpha chain
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
cms
Clavibacter sepedonicus
Pathway
cms03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cms00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CMS0316
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cms03021
]
CMS0316
03400 DNA repair and recombination proteins [BR:
cms03400
]
CMS0316
Enzymes [BR:
cms01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CMS0316
Transcription machinery [BR:
cms03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CMS0316
DNA repair and recombination proteins [BR:
cms03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CMS0316
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
AMIN-like
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
CAQ00437
UniProt:
B0RB72
LinkDB
All DBs
Position
347704..348699
Genome browser
AA seq
331 aa
AA seq
DB search
MLIAQRPTLTEESISEFRSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFSTVPGVKEDVTEIILNIKGLVVSSEHDEPITAYLRKQGAGQVTAADISAPAGVEIHN
PELVIATLNEKAKFELELTIERGRGYVSATQNRSEFSEAGQIPVDSIYSPVLKVTYRVEA
TRAGERTDFDRLVVDVETKSAITPRDAIASAGRTLTELFGLARELNSAAEGIEIGPAPVD
AVLSSELSMPIEDLDLSVRSYNCLKREGIHNVSELVALSETQLMNIRNFGQKSVDEVKDK
LVELGLSLKDAVPGFDGAHYYSYDEDETTTN
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
gtgctcattgcgcagcgccccaccctcaccgaggagtccatctcggagttccgctcgcgg
ttcgtcatcgagccgctcgagcccggcttcggctacacgctcggcaactcgctccgccgc
accctcctgtcgtccatccccggcgcggccgtcaccagcatccggatcgacggcgtgctg
cacgagttcagcaccgtccccggcgtgaaggaggacgtgaccgagatcatcctcaacatc
aagggcctcgtcgtctccagcgagcacgacgagccgatcaccgcgtacctgcgcaagcag
ggtgcgggccaggtcacggccgccgacatctcggctccggccggcgtcgagatccacaac
cccgagctcgtcatcgccacgctcaacgagaaggcgaagttcgagctggagctgacgatc
gagcgcggtcgcggctacgtctcggcgacccagaaccgcagcgagttcagcgaggctggc
cagatcccggtcgactccatctactcgcccgtgctcaaggtcacctaccgcgtcgaggcc
acccgtgccggcgagcgcaccgacttcgaccgcctcgtggtcgacgtcgagacgaagtcg
gccatcacgccgcgcgacgccatcgcgtccgccggtcgcacgctcaccgagctgttcggc
ctggcgcgggagctcaactcggccgcagagggcatcgagatcggccccgcgccggtcgac
gccgtcctcagctccgagctgtcgatgcccatcgaggacctcgacctctcggtgcggtcg
tacaactgcctcaagcgcgagggcatccacaacgtcagcgagctcgtcgccctctcggag
acgcagctcatgaacatccgcaacttcggacagaagtcggtggatgaggtcaaggacaag
ctggtcgagctcggtctgtcgctgaaggacgccgtccccggcttcgacggcgcgcactac
tacagctacgacgaggacgagaccaccaccaactga
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integrated database retrieval system
