Clavibacter sepedonicus: CMS0451
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Entry
CMS0451 CDS
T00678
Name
(GenBank) putative deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
cms
Clavibacter sepedonicus
Brite
KEGG Orthology (KO) [BR:
cms00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cms03400
]
CMS0451
Enzymes [BR:
cms01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
CMS0451
DNA repair and recombination proteins [BR:
cms03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
CMS0451
Prokaryotic type
CMS0451
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
CAQ00571
UniProt:
B0RCH2
LinkDB
All DBs
Position
complement(485394..486920)
Genome browser
AA seq
508 aa
AA seq
DB search
MSDDDAPDHGSADREGADQAHGPTIVWLRDDLRVADNPAMHAAVERGEPIVVLYVLDEES
AGIRPLGGAARWWLHMSLSRLGESLRGLGSPLVLRRGKAADVVDDLVREVGAGAVLWNRR
YGGAEIAVDTAIKKDLGDRGLDVRSFQGSLLVEPWTVVNKQGEPFRVYTPFWKTAQDREE
PRKPFPAPDALEAPRKAPRSDDLDDWGLLPTKPDWAAGLREACDPGEAAGLQRLEDFVHH
ELEDYAAQRDEPAAMTTSRLSAYLRWGEVSPFQVWHRVQRTRGKKVGGDEVNATKFLSEL
GWREFSYHLLYHQPDLATRNFVPRFDAFPWDEPRDDTLGAWQRGETGVPLVDAGMRALWK
DGHLHNRVRMVVASFLIKNLLIDWRHGEQWFWDTLVDADAANNAASWQWVAGSGADAAPY
FRVFNPVLQGQKFDPSGEYIRSYVPELAHAPRDVVHEPWKAQGDLVASAEDDADASADGG
LAAYPSPIVDLKESRQRALAAYDEIKDR
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacgacgacgcccccgaccacggatccgcggaccgggagggcgccgaccaggcg
cacggcccgacgatcgtgtggctccgcgacgacctccgcgtggccgacaacccggcgatg
cacgccgccgtcgagcggggcgagccgatcgtggtgctgtacgtgctcgacgaggagagc
gcggggatccgcccgctcggcggcgccgcccgctggtggctgcacatgagcctgtcgcgg
ctcggggagtcgctccgggggctcggctcgccgctcgtgctgcgccgggggaaggccgcc
gacgtcgtcgacgatctcgtgcgggaggtcggcgcgggcgccgtgctgtggaaccgacgc
tacggcggcgcggagatcgcggtcgacaccgccatcaagaaggacctcggcgaccgcggg
ctcgacgtccgcagcttccagggatcgctgctcgtcgagccgtggacggtggtgaacaag
cagggcgagcccttccgcgtgtacacgcccttctggaagaccgcgcaggatcgtgaggag
ccgcggaagccgttccccgcaccggacgcgctcgaggcaccgcggaaggcgccccgctcc
gacgacctcgacgactggggcctgctgccgacgaagcccgactgggcggccggcctgcgg
gaggcctgcgatcccggcgaggccgcggggctgcagcgcctcgaggacttcgtccaccac
gagctggaggactacgccgcccagcgcgacgagcccgcggcgatgacgacctcccggctg
tcggcgtacctgcgctggggcgaggtgagcccgttccaggtgtggcaccgggtccagcgc
acccgcggcaagaaggtgggcggcgacgaggtcaacgcgaccaagttcctctccgagctg
ggatggcgcgagttcagctaccacctgctgtaccaccagccggatctcgcgacccgcaac
ttcgtgccccgcttcgacgcgttcccgtgggacgagccgcgcgacgacaccctcggcgcg
tggcagcgcggcgagaccggcgtgcccctcgtggacgccggcatgcgcgcgctctggaag
gacgggcacctgcacaaccgggtgcgcatggtggtcgcgtcgttcctcatcaagaacctg
ctgatcgactggcgccatggcgagcagtggttctgggacacgctcgtcgacgcggacgcg
gccaacaacgcggcgagctggcagtgggtcgcgggatccggtgcggacgccgccccgtac
ttccgcgtgttcaaccccgtgctgcaggggcagaagttcgacccgtctggcgagtacatc
cgctcctacgtgcccgagctcgcgcacgcgccgcgggacgtcgtgcacgagccgtggaag
gcgcagggcgacctggtcgcgagcgccgaggacgacgccgacgcctcggccgacggcggg
ctggcggcgtacccgtcgcccatcgtcgacctgaaggagtcccggcagcgggcgctggcg
gcctacgacgagatcaaggaccggtga
DBGET
integrated database retrieval system
