Clavibacter sepedonicus: CMS0560
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Entry
CMS0560 CDS
T00678
Name
(GenBank) putative DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
cms
Clavibacter sepedonicus
Brite
KEGG Orthology (KO) [BR:
cms00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cms03400
]
CMS0560
DNA repair and recombination proteins [BR:
cms03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CMS0560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
DUF7125
ChlI
DnaB_C
Lon_C
AAA_22
AAA
RecA_N
AAA_16
nSTAND_NTPase5
AAA_30
nSTAND3
NTPase_1
DAP3
AAA_19
IstB_IS21
AAA_5
ATPase_2
ATP-synt_ab
CbiA
NACHT
AAA_24
AAA_14
AAA_18
Bac_DnaA
MMR_HSR1
ArsA_ATPase
AAA_29
NPHP3_N
ABC_tran
SLFN-g3_helicase
ParA
KTI12
Motif
Other DBs
NCBI-ProteinID:
CAQ00680
UniProt:
B0RD81
LinkDB
All DBs
Position
complement(589491..590882)
Genome browser
AA seq
463 aa
AA seq
DB search
MSEAPGRVPRMARIHSTYRCSECGWTTPKWVGRCAECQSWNTVAEVSQTPAAAGRVTTLT
PAGSSQARSIMHVGTASASHMPSGVGELDRVLGGGIVPGAAILMSGEPGVGKSTLLLEVA
ARAAAKGAKVLYVTAEESVAQVRMRAERTGGLQESLMIAAETDLGTILGHIEQVAPDLLI
VDSVQTVSSSTSDGLPGHPGQVREVAVTLIRVCKERDLPLLLVGHVTKDGSIAGPRLLEH
LVDVVCQFEGDRQTSLRFIRALKNRFGPTDEVGCFEMAGDGIVEVPDPSGMFLSRGVHSV
SGTCVTVAMEGRRALPVEVQALVVDTKAPQPRRVVNGVDASRVAMLLAVLEKRANVRLSD
RDVYVSTVGGVRLTEPAADLAIAVALVSAVNGKAMPHDLAAFGEISLAGEIRGVTSAPQR
AAEARRLGFTQIVDAEWGPLFSALGRAFSLAKSEREKELDEAF
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaggcccccggtagagtcccccgcatggcccgcatccactccacgtaccgctgc
tcggagtgcgggtggaccaccccgaagtgggtcgggcggtgcgccgagtgccagagctgg
aacaccgtcgccgaggtgtcgcagacgcccgcggcggccggccgggtcaccacgctcaca
cccgccggatccagccaggcgcggtcgatcatgcacgtcggcaccgcgtccgccagccac
atgccgagcggcgtcggcgagctcgaccgcgtgctcggcggcggcatcgtgccgggcgcc
gccatcctcatgagcggcgagcccggcgtcggcaagtccacgctgctgctcgaggtcgcc
gcgcgcgccgccgcgaagggcgcgaaggtcctctacgtgacggccgaggagtcggtcgcc
caggtgcgcatgcgcgccgagcgcacgggcgggctgcaggagtcgctcatgatcgcggcc
gagaccgacctcggcacgatcctcggccacatcgagcaggtcgcgcccgacctcctcatc
gtcgactccgtgcagaccgtctccagcagcacgtccgacggcctgcccggccaccccggc
caggtgcgcgaggtcgccgtcacgctcatccgcgtctgcaaggagcgcgacctgcccctg
ctcctcgtcggccacgtcaccaaggacggctccatcgccggcccccggctcctcgagcac
ctcgtcgacgtcgtgtgccagttcgagggcgaccggcagacgtcgctccgcttcatccgc
gcgctcaagaaccgcttcggccccaccgacgaggtcggctgcttcgagatggcgggcgac
ggcatcgtcgaggtgccggatccgagcggcatgttcctctcgcgcggtgtgcactcggtc
tccggcacgtgcgtcaccgtcgcgatggagggccgccgcgctctgcccgtcgaggtgcag
gcgctcgtcgtcgacacgaaggcgccgcagccgcgccgcgtggtcaacggggtggatgcg
tcgcgcgtcgccatgctgctggccgtgctcgagaagcgcgccaacgtgcggctctcggat
cgcgacgtctacgtctccacggtcggcggcgtccgcctcaccgagcccgccgcggatctc
gccatcgccgtcgcgctcgtctccgccgtcaacggcaaggccatgccccacgacctcgcg
gcgttcggcgagatcagcctcgcgggagagatccgcggcgtcacgtcggcgccgcagcgc
gcggcggaggcccggcggctcggcttcacgcagatcgtcgacgccgagtggggcccgctg
ttctccgcgctgggccgtgcgttctccctcgcgaagagcgagcgggagaaggagctcgac
gaggcgttctga
DBGET
integrated database retrieval system
