Clavibacter sepedonicus: CMS0580
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Entry
CMS0580 CDS
T00678
Name
(GenBank) putative DeoR-family transcriptional regulator
KO
K02081
DeoR family transcriptional regulator, aga operon transcriptional repressor
Organism
cms
Clavibacter sepedonicus
Brite
KEGG Orthology (KO) [BR:
cms00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cms03000
]
CMS0580
Transcription factors [BR:
cms03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
CMS0580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DeoRC
HTH_DeoR
HTH_11
GntR
HTH_PafC
HTH_20
HTH_5
Put_DNA-bind_N
HTH_AsnC-type
Motif
Other DBs
NCBI-ProteinID:
CAQ00700
UniProt:
B0RDQ7
LinkDB
All DBs
Position
complement(607629..608459)
Genome browser
AA seq
276 aa
AA seq
DB search
MADDSAPVPAATRRSRILERLADRGFATVAELAADAGVSAVTIRADLDALADSAAVQRVH
GGAVLRAGLGAREQSLEVTLESAADAKRAIGRAAADLVESGQSVLLDVGSTTLQVARALV
ARDDLVDVTVITNGLTLALELERAMPRFTVVVTGGTLRALQHSLVDPLATVVLDRLHPDV
AFIGCNGIDVDRGVTNVNLPEAEVKRRMVDASARTIVVADGSKAGRTHLGSVAPLDRIDM
LLTDADADADPRELGRLRDSGLRVVQAGGSPGAARP
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgactccgctcccgtccccgcggcgacccgccggtcgcgcatcctcgagcgg
ctcgccgaccgcggcttcgcgaccgtcgccgagctcgcggccgacgcgggcgtctccgcc
gtcacgatccgcgccgacctcgacgcgctcgccgactccgccgccgtgcagcgcgtgcac
ggcggcgccgtgctccgcgcaggtctcggcgcgcgcgagcagagccttgaggtgacgctc
gagtcggccgccgacgccaagcgcgccatcggccgggccgccgccgacctcgtcgagagc
ggccagagcgtgctgctcgacgtcggcagcacgacgctccaggtggcccgcgcgctcgtc
gcgcgcgatgacctcgtcgacgtcaccgtcatcacgaacgggctcacgctcgcgctcgag
ctcgagcgcgccatgccgcgcttcacggtggtcgtcacgggcggcacgctccgggcgctg
cagcacagcctcgtggatccgctcgccaccgtcgtgctcgaccgcctgcacccggacgtc
gccttcatcggctgcaacgggatcgacgtcgatcgcggcgtcacgaacgtcaacctgccg
gaggccgaggtgaagcggcggatggtcgacgcgagcgcccgcacgatcgtcgtggcggac
ggctccaaggccggccgcacgcacctcggatccgtcgcgcccctcgaccggatcgacatg
ctcctgaccgacgccgacgccgacgcggatccgcgcgagctcggccgcctgcgcgactca
gggctgcgcgtcgtccaggccggcgggtcgcccggggccgcgcggccgtaa
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