Clavibacter sepedonicus: CMS0589
Help
Entry
CMS0589 CDS
T00678
Name
(GenBank) putative LysR-family transcriptional regulator
Organism
cms
Clavibacter sepedonicus
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_20
MarR_2
HTH_24
HTH_30
HTH_28
HTH_5
HTH_AsnC-type
HTH_23
Fe_dep_repress
Sigma70_r4
MarR
HTH_50
DUF6074
HTH_10
HTH_Tnp_ISL3
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
CAQ00709
UniProt:
B0RDR6
LinkDB
All DBs
Position
complement(617154..618011)
Genome browser
AA seq
285 aa
AA seq
DB search
MLDPTLLATFLAVADTRSFTQAAARLGISQPTVSQQVRRLERAVDRTLIARDTRAMRLTD
AGDAMAGFARTILAAHRAAESYFGGSEVSGRLRFGTADDLAITQLPRILRHFRQLHPQIE
LELTVTQSGPLHRRLLAGQLDLILTKTTVDEQPSARLVGRDRMVWVGLERTLVEAGATVP
LIAYRAPSISRQMAMDALERAGRTWRITCSTRDVNGVLAAVRAGMGVAVLPQALIPTDLV
KVTSRLGLPELDEVDYVLMDNPAGPRASIEALTSAIMSRGVTRAS
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgacccgaccctgctcgcgacgttcctcgccgtcgccgacacccgcagcttcacg
caggcggccgcgcggctcggcatcagccagccgaccgtgagccagcaggtgcgccggctc
gagcgggccgtcgaccgcacgctcatcgcgcgcgacacccgggcgatgcgcctcaccgac
gcgggggacgcgatggccggcttcgcgcgcacgatcctcgcggcgcaccgggcggcggag
agctacttcggcggatccgaggtgagcggccgtctgcgcttcggcaccgcggacgacctc
gccatcacgcagctgccgcggatcctccgccacttccggcagctgcacccgcagatcgag
ctggagctcacggtgacgcagagcgggccgctgcaccggcggctgctcgcgggccagctc
gacctgatcctcaccaagaccacggtcgacgagcagccgtccgcccggctcgtcggccgc
gaccggatggtgtgggtgggcctcgagcgcacgctcgtcgaggcgggcgcgaccgtgccg
ctcatcgcgtaccgcgcgccgagcatcagcaggcagatggcgatggacgcgctcgagcgg
gcgggccgcacctggcggatcacgtgcagcacgcgcgacgtgaacggcgtgctcgcggcg
gtgcgcgcgggcatgggcgtcgcggtgctgccgcaggcgctcatcccgaccgacctcgtg
aaggtgacctcgcgtctcggcctgcccgagctcgacgaggtggactacgtgctgatggac
aacccggcgggaccgcgcgcgtcgatcgaggcgctgacgtcggcgatcatgtcgcgcggg
gtgacgcgcgcgagctga
DBGET
integrated database retrieval system
