Clavibacter sepedonicus: CMS0629
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Entry
CMS0629 CDS
T00678
Name
(GenBank) putative sugar dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
cms
Clavibacter sepedonicus
Pathway
cms00521
Streptomycin biosynthesis
cms00523
Polyketide sugar unit biosynthesis
cms00525
Acarbose and validamycin biosynthesis
cms00541
Biosynthesis of various nucleotide sugars
cms01100
Metabolic pathways
cms01110
Biosynthesis of secondary metabolites
cms01250
Biosynthesis of nucleotide sugars
Module
cms_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
cms00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
CMS0629
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
CMS0629
01055 Biosynthesis of vancomycin group antibiotics
CMS0629
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
CMS0629
00525 Acarbose and validamycin biosynthesis
CMS0629
Enzymes [BR:
cms01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
CMS0629
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Gene cluster
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
RmlD_sub_bind
NAD_binding_10
NmrA
adh_short
Sacchrp_dh_NADP
SelO
Motif
Other DBs
NCBI-ProteinID:
CAQ00749
UniProt:
B0RDV6
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Position
complement(663814..664803)
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AA seq
329 aa
AA seq
DB search
MRILVTGGAGFIGSNFVRHALQDHYAGLEGADVVVLDALTYSGNLENLAPVSDSPRYTFV
QGDIRDDAVLDEWIPQVDAVVHFAAESHVDRSVRDASIFVETNVLGTQKLLDAALRHDLK
RFVHVSTDEVYGSIAEGSWDEERPLEPNSPYSASKAGSDLLARSYHRTHGLNVSITRCSN
NYGPYHFPEKVIPLFVTNLIDDKHVPLYGEGLNIRDWLHVDDHCRGIALVLVQGAPGEIY
NIGGGTELTNRELTQLLLDATGRDWSYVDRVEDRKGHDLRYSVDISKIQRELGYAPQVPF
AEGLADVVQWYRDNRAWWEPLKARAELPA
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgaggatcctcgtgaccggcggcgccggcttcatcggctccaacttcgtgcgccacgcg
ctccaggaccactacgccgggctcgagggcgcggacgtcgtcgtgctcgacgcgctgacc
tactccggcaacctcgagaacctcgcgcccgtcagcgactcgccgcgctacacgttcgtc
cagggcgacatccgcgacgacgccgtgctcgacgagtggatcccgcaggtcgacgcggtc
gtgcacttcgcggccgagagccacgtcgaccgctccgtgcgcgacgcgagcatcttcgtc
gagaccaacgtgctcggcacgcagaagctcctcgacgccgcgctccgccacgacctcaag
cgcttcgtccacgtctccaccgacgaggtctacggatccatcgccgagggctcgtgggac
gaggagcggccgctcgagccgaactcgccctactccgcgtcgaaggccggcagcgacctg
ctcgcccgctcgtaccaccgcacgcacgggctgaacgtgtccatcacgcgctgctcgaac
aactacgggccgtaccacttccccgagaaggtcatcccgctcttcgtcacgaacctcatc
gacgacaagcacgtgccgctctacggcgagggcctcaacatccgcgactggctgcacgtc
gacgaccactgccgcggcatcgcgctcgtgctcgtgcagggcgcgcccggcgagatctac
aacatcggcggcggcaccgagctcaccaaccgcgagctcacgcagctgctcctcgacgcc
accggccgcgactggtcgtacgtcgaccgcgtcgaggaccgcaagggccacgacctgcgc
tactcggtcgacatctccaagatccagcgcgagctcggctacgcgccgcaggtgccgttc
gccgagggcctcgccgacgtggtgcagtggtaccgcgacaaccgcgcgtggtgggagccg
ctgaaggcgcgcgccgagctacccgcgtga
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