Clavibacter sepedonicus: CMS0718
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Entry
CMS0718 CDS
T00678
Symbol
ruvB
Name
(GenBank) holliday junction dna helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
cms
Clavibacter sepedonicus
Pathway
cms03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cms00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CMS0718 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cms03400
]
CMS0718 (ruvB)
Enzymes [BR:
cms01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CMS0718 (ruvB)
DNA repair and recombination proteins [BR:
cms03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CMS0718 (ruvB)
RecFOR pathway proteins
CMS0718 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_16
TIP49
Mg_chelatase
MCM
Zeta_toxin
nSTAND3
AAA_22
AAA_3
NB-ARC
Sigma54_activ_2
AAA_14
IstB_IS21
AAA_18
NTPase_1
AAA_33
AAA_25
NPHP3_N
Rad17
Resolvase
AAA_19
ABC_tran
AAA_24
Motif
Other DBs
NCBI-ProteinID:
CAQ00838
UniProt:
B0REC0
LinkDB
All DBs
Position
762892..763971
Genome browser
AA seq
359 aa
AA seq
DB search
MSGLAHGDASSPVPESDAELAFEGALRPRSLSEFVGQVKVRGQLELLLTAAAMQNRSPDH
ILLAGPPGLGKTTLAMIVAEESRRPLRLTSGPAIQHAGDLAAVLSALVPGEILFVDEIHR
MARSAEEMLYLAMEDYRIDIMVGKGAGATSIPLELSPFTLVGATTRSGMLPSPLRDRFGF
TAHLEFYETHELEQVIERAARMLHLEIEHEAVAEIAGRCRGTPRIANRLLRRVRDYALVH
GTEAGLESVRAALDLYDVDPLGLDRLDRAVMRGILTRFGGGPVGLNTLAVSVGEEAETIE
SVVEPFLVRIGLVTRTPRGRVATPAAWEHFGLEAPAAPGAPGRAPGPSGAAGALHSDEL
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
gtgagcggcctcgcccacggcgacgcgtccagtcccgtcccggagtccgacgcggagctc
gcgttcgagggggccctccgcccacggtcgctgtccgagttcgtcggccaggtcaaggtg
cgcggacagctggagctgctgctcaccgccgcggccatgcagaaccgctcgcccgaccac
atcctcctcgccggccctcccggcctcggcaagacgacgctcgcgatgatcgtcgccgag
gagagccgccgtccgctgcgcctcacgagcggtccggccatccagcacgcgggcgacctc
gcggccgtgctgtcggcgctggtgcccggcgagatcctcttcgtcgacgagatccaccgc
atggcgcgctcggccgaggagatgctgtacctcgccatggaggactaccgcatcgacatc
atggtcggcaagggcgcgggcgccacgtccatcccgctggagctctcgccgttcacgctg
gtcggcgccaccacgcgctcgggcatgctgccgagtccgctccgcgaccgcttcggcttc
accgcgcacctcgagttctacgagacccacgagctcgagcaggtgatcgagcgggccgcc
cgcatgctgcacctcgagatcgagcacgaggcggtcgccgagatcgcgggccgctgccgg
gggacgccgcgcatcgcgaaccggctgctccgccgtgtgcgcgactacgcgctcgtgcac
gggacggaggcgggcctcgagtcggtccgggccgcgctcgacctctacgacgtggacccg
ctcggcctcgaccgcctcgaccgcgccgtcatgcgcggcatcctcacgcgcttcggcggc
ggaccggtggggctgaacacccttgcggtatcggtgggggaggaggcggagacgatcgag
tcggtcgtcgagccgttcctcgtccgcatcgggctggtgacgcgcacgccccgcggccgc
gtggcgacaccggcggcatgggagcacttcggcctcgaggcccccgccgcgccgggtgct
cccggtcgggcaccgggtccttccggagccgccggggccctccacagcgatgaactatga
DBGET
integrated database retrieval system
