Clavibacter sepedonicus: CMS1040
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Entry
CMS1040 CDS
T00678
Name
(GenBank) putative GntR-family regulatory protein
Organism
cms
Clavibacter sepedonicus
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
GntR
Asp_aminotransf
HTH_Crp_2
HTH_11
HTH_AsnC-type
POTRA_2
HTH_50
Motif
Other DBs
NCBI-ProteinID:
CAQ01154
UniProt:
B0RG17
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Position
1083851..1085263
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AA seq
470 aa
AA seq
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MLGPTALTALLGEWARPGAPVYQALADGIRHLVLDGRVPVGARLPAERELATALGLSRTT
VAAAYAALRGTGHLASRRGSGSVTRIPRSAPHAEGGGREVADMSRAAVPAAPALADAATR
AVARLPAHLEGHGYDVDGLPELREAIAARYRARGLPTEADDVMVTVGAQHAIGLLASVLV
HRGDRALVEQPSYPHAIQALRDSGARLVGAGVGADGWDEDVLEQTIRRTRPALAYLMPDF
HNPTGRTMPEDQRARIVVLAEAHGVTLIADETTAELDIDRATAHPPLAVHGSPGAVVLVG
SVGKTVWGGLRVGWIRAGRPLLRELARARSARDLGTPVLEQLVVAEVLGGMDGILAVRRT
RLRETRDHVEAELARRFPGWEVPHVDGGLAVWVGIGAPVSTELALAARSRGLAITGGSRF
GHDGAFERFLRIPITAPPAATDRALDILEDAWRGLSPAPGLDLVDRSVLV
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
gtgctcggaccgaccgccctcaccgcgctgctgggggagtgggcgcggcccggggcgccc
gtgtaccaggcgctcgccgacgggatccggcatctcgtgctcgacggacgcgtgcccgtg
ggagcgcgcctccccgccgagcgggagctcgcgaccgcgctcggcctcagccgcaccacg
gtcgcggccgcctacgcggcgctgcgcgggaccggccacctcgcgagccgtcgcggctcg
ggcagcgtgacgcggatcccccggagcgcgccgcacgcggagggcggcggccgagaggtg
gccgacatgagccgcgccgccgtgcccgcggcgcccgcgctcgccgacgccgcgacgcgc
gccgtcgcccggctgcccgcgcacctcgaggggcacggctacgacgtcgacgggctgccg
gagctgcgcgaggcgatcgccgcccgctaccgcgcgcgcggcctgccgaccgaggccgac
gacgtcatggtgacggtcggcgcgcagcacgcgatcggcctgctcgcctcggtcctcgtg
caccgcggcgaccgcgcgctcgtcgagcagccgagctacccgcacgcgatccaggcgctg
cgcgactccggcgcgcgcctcgtcggggccggggtgggcgccgacggctgggacgaggac
gtgctcgagcagacgatccgccgcacgcggcccgcgctcgcgtacctcatgcccgacttc
cacaaccccacgggccgcacgatgcccgaggaccagcgggcgcggatcgtggtgctcgcc
gaggcgcacggggtgaccctcatcgccgacgagacgacggccgagctggacatcgaccgg
gcgaccgcgcatccgccgctcgccgtgcacgggtcgccgggcgcggtggtgctcgtcggg
tcggtggggaagacggtgtggggtgggctgcgcgtcgggtggatccgcgcgggccggccg
ctcctccgcgagctcgcccgggcgcgctcggcccgcgacctcggcacgcccgtgctcgaa
cagctggtggtggcggaggtgctaggcgggatggacgggatcctcgccgtgcgccgcacc
cgcctgcgcgagacgcgcgaccacgtcgaggcggagctcgcgcggcggttccccgggtgg
gaggtcccgcacgtggacggcgggctcgcggtgtgggtcgggatcggcgcgcccgtgagc
acggagctcgcgctcgccgcccggtcgcgggggctggcgatcacgggcgggagccggttc
ggccacgacggcgcgttcgagcggttcctgcggatcccgatcaccgcgccgcccgccgcc
accgaccgcgcgctcgacatcctcgaggacgcgtggcgggggctctccccggcgcccggt
ctcgacctcgtggaccggtcggtcctcgtctag
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