Clavibacter sepedonicus: CMS1059
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Entry
CMS1059 CDS
T00678
Symbol
fadD
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
cms
Clavibacter sepedonicus
Pathway
cms00061
Fatty acid biosynthesis
cms00071
Fatty acid degradation
cms01100
Metabolic pathways
cms01212
Fatty acid metabolism
cms02024
Quorum sensing
cms04146
Peroxisome
Module
cms_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
cms00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
CMS1059 (fadD)
00071 Fatty acid degradation
CMS1059 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
CMS1059 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
CMS1059 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
cms01004
]
CMS1059 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cms04147
]
CMS1059 (fadD)
Enzymes [BR:
cms01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
CMS1059 (fadD)
Lipid biosynthesis proteins [BR:
cms01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
CMS1059 (fadD)
Exosome [BR:
cms04147
]
Exosomal proteins
Exosomal proteins of breast milk
CMS1059 (fadD)
Exosomal proteins of breast cancer cells
CMS1059 (fadD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
CAQ01173
UniProt:
B0RGB7
LinkDB
All DBs
Position
complement(1111740..1113437)
Genome browser
AA seq
565 aa
AA seq
DB search
MGGVTTPTDRPWLASYAPDVPHEIDLPQGSLVDIVDQSVLRFPGGTALDFLGAETSYRDL
GEQIARAAQGLHDAGVRAGDPVAIVLPNCPQHVVAFYAVLRLGAVVVEHNPLYTPRELQH
QFEDHGARTVIAWDRSVATILGLPDGARPERIVSVDVTRAMPLRTRLRLRLPVPKARAAR
AAIAAKVTGTITWERISAASPLPVDHPRPAATDLAVIQYTSGTTGAPKGAELTHLNLSAN
AAQSRAWVPTVPRGTSVVYAALPMFHAYGLTLCLTFAMSMGSRLVLFPRFEPDLVLQAIR
RHPPTFLPAVPPIYKRLREAAEAEGVSLAGISISISGAMALPESVVVPWEEQTGGWLVEG
YGLSECSPVLMANPVGDTRRAGTVGLPLPNTEVRVVDPEDPTVDRPVGEAGELLVRGPQV
FRGYHGRPDETAAVLLDGGWFRTGDVVTIDEDGFVRIADRIKELIITGGFNVSPSEVEDA
VRGIPGVRDAAVVGIPRDDGDEEVVAAVVLEEGATLDEQAARTTLRGELAAYKVPRLIVV
LDELPTSLLGKVLRRKVREGIVDAG
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
gtgggaggggtgaccacccccaccgaccggccctggctggccagctacgcgcccgacgtc
ccgcacgagatcgacctgccgcagggatcgctcgtcgacatcgtcgaccagtccgtgctc
cggttccccggcggcaccgcgctcgacttcctgggggccgagaccagctaccgcgacctc
ggcgagcagatcgcacgcgcggcccagggcctgcacgacgcgggcgtccgggcgggcgac
ccggtggcgatcgtgctgccgaactgcccgcagcacgtcgtcgcgttctacgcggtgctg
cgcctcggcgccgtggtcgtcgagcacaacccgctctacacgccgcgcgagctgcagcac
cagttcgaggaccacggcgcgcgcacggtgatcgcgtgggacaggtcggtcgcgaccatc
ctgggcctgcccgacggcgcgcggcccgagcgcatcgtctccgtcgacgtgacgcgggcc
atgccgctgcgcacccggctgcgcctccgcctgcccgtcccgaaggcccgtgcggcccgc
gccgccatcgccgccaaggtgacgggcacgatcacctgggagcggatctccgccgcgtca
cccctgcccgtcgaccacccgcgcccggcggcgaccgacctcgcggtgatccagtacacg
agcggcacgacgggagcgcccaagggcgccgagctcacccacctcaacctcagcgcgaac
gcggcccagtcgcgcgcctgggtgccgacggtcccccgcggcacgagcgtcgtctacgcg
gcgctgccgatgttccacgcctacgggctgaccctctgcctcaccttcgcgatgagcatg
ggctcgcgcctggtgctgttcccccgcttcgagcccgacctcgtgctgcaggcgatccgc
cgccacccgccgacgttcctgcccgccgtgccgcccatctacaagcgcctgcgcgaagcc
gccgaggcggagggcgtgtccctcgcggggatctcgatctccatctccggagcgatggcg
ctgcccgagtcggtcgtggtgccctgggaggagcagaccggcggctggctcgtcgagggc
tacggcctctcggagtgctcgcccgtgctgatggccaaccccgtcggcgacacgcggcgc
gcggggacggtcggcctgccgctgcccaacaccgaggtgcgcgtcgtggatcccgaggac
ccgaccgtcgaccggcccgtgggcgaggccggcgagctgctcgtgcgcggaccccaggtg
ttccgcggctaccacggccgacccgacgagacggccgccgtgctgctcgacggcggctgg
ttccgcacgggcgacgtggtcaccatcgacgaggacggcttcgtgcgcatcgccgaccgg
atcaaggagctcatcatcacgggcggcttcaacgtctcgccgagcgaggtcgaggacgcg
gtgcgcggcatccccggcgtgcgggacgcggcggtcgtcgggatcccgcgcgacgacggc
gacgaggaggtcgtcgcggccgtggtcctcgaggagggcgcgacgctcgacgagcaggcc
gcgcggacgacgctgcgcggcgagctcgccgcctacaaggtgccgcggctcatcgtggtg
ctcgacgagctgccgacctcgctcctcggcaaggtgctgcgccggaaggtgcgcgagggg
atcgtcgacgcgggctag
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