Clavibacter sepedonicus: CMS1161
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Entry
CMS1161 CDS
T00678
Name
(GenBank) putative DNA glycosylase
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
cms
Clavibacter sepedonicus
Pathway
cms03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cms00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CMS1161
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cms03400
]
CMS1161
Enzymes [BR:
cms01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
CMS1161
DNA repair and recombination proteins [BR:
cms03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CMS1161
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AlkA_N
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
CAQ01276
UniProt:
B0RGU2
LinkDB
All DBs
Position
complement(1214570..1215493)
Genome browser
AA seq
307 aa
AA seq
DB search
MDSPGAAAPAHVARTVLEVPAPFDGDGVIRFLSWHAVTGAEEGDTTSFTQSARLAHGAGT
VTVRLVDREPGDEVTTRVEHAADAPELLAGTRRLLGLDVDAARIDADLARDPALAAAVRA
TPGLRIPGTLDPRSTLFRTIVGQQISVASARATHRRMTADLGEDLPGSVAHGSVTRLPPT
AARIARDGAELLRGPARRTATLTRIAEALETGELMIEHGMPRAELRAALVAFHGVGPWTA
DYVAMRALGEPDILLSGDLIVRRGAAALGLPDEARALDARAAAWSPWRSYATLHLWRVMT
DGIPAAG
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atggactcccccggcgccgcggcgcccgcgcacgtcgcccggacggtgctcgaggtgccg
gcgcccttcgacggcgacggcgtgatccgcttcctctcctggcatgccgtcacgggcgcc
gaggagggcgacacgacctcgttcacgcagtcggcccggctcgcgcacggcgcggggacg
gtgaccgtgcgcctcgtcgaccgcgagcccggcgacgaggtgaccacccgcgtcgagcac
gccgccgacgcccccgagctcctcgccggcacgcgccgcctgctcggcctcgacgtcgac
gcggcccgcatcgacgcggacctcgcccgcgaccccgcgctcgccgccgccgtgcgcgcg
acgcccggcctccgcatccccggcacgctggatccgcgctcgaccctcttccgcacgatc
gtgggccagcagatctcggtcgcctccgcacgcgccacccatcgccgcatgacggcggac
ctcggtgaggacctgcccgggtcggtcgcgcacggatccgtcacccgcctcccgcccacc
gccgcgcgcatcgcccgcgacggcgcggagctgctgcgcgggccggcacgacgcacggcg
acgctgacccgcatcgccgaggccctcgagacgggcgagctcatgatcgagcacggcatg
ccgcgagcggagctccgggcggcgctcgtcgccttccacggcgtcggcccgtggaccgcc
gactacgtcgcgatgcgcgcgctcggcgagcccgacatcctgctctccggcgacctcatc
gtccgccgcggtgccgccgccctcgggctccccgacgaggcgcgcgccctcgacgcgcgc
gccgccgcgtggtcgccgtggcgctcctacgcgaccctgcacctctggcgcgtgatgacc
gacgggattccggccgcgggctga
DBGET
integrated database retrieval system
