Clavibacter sepedonicus: CMS1230
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Entry
CMS1230 CDS
T00678
Symbol
pheT
Name
(GenBank) putative phenylalanyl-tRNA synthetase beta chain
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
cms
Clavibacter sepedonicus
Pathway
cms00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cms00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CMS1230 (pheT)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cms01007
]
CMS1230 (pheT)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cms03016
]
CMS1230 (pheT)
Enzymes [BR:
cms01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
CMS1230 (pheT)
Amino acid related enzymes [BR:
cms01007
]
Aminoacyl-tRNA synthetase
Class II (U)
CMS1230 (pheT)
Transfer RNA biogenesis [BR:
cms03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
CMS1230 (pheT)
Prokaryotic type
CMS1230 (pheT)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
B5
FDX-ACB
tRNA_bind
Motif
Other DBs
NCBI-ProteinID:
CAQ01346
UniProt:
B0RHC9
LinkDB
All DBs
Position
1282169..1284712
Genome browser
AA seq
847 aa
AA seq
DB search
MRIPISWLGEHVELPAGVTPEDVHASLVKVGLEEEDVHAFSISGPVVVGQVLEASPEPQT
NGKTINWCSVRVAPEGATAADGGEDVRGIVCGAHNFVVGDKVVVSLPGAVLPGPFPISAR
KTYGHVSDGMIASSRELGLGEEHDGILVLSTLGLDPEVGTDALALLHLDDQAVEVNVTPD
RGYAFSIRGIAREYAHATGAAFTDPADALALLAADAPVQGVEVRVDDAAPIRGRVGADVF
VTRVVSGLDLSRPTPPWMVSRLTLAGVRSISLAVDITNYVMLELGQPLHAYDLDRLQGGI
VVRRAAEGETLVTLDGRERALHVEDLVIADGSGPVGLAGVMGGAATEIGAGTSRVLIEAA
GFDPVSIARTARRHKLPSEASKRFERGVDPRIAPAAAARAVQLLEELAGGHAEGLGSILD
TTAPREAVELSLAYPASLVGVDYTADEVRHALVDVGCALEERDGVLVVTPPTWRPDLRHR
ADLVEEVARIVGYDRIPAVLPVAPPGRGLTAAQRLRRQASIALAAGGLTEVMGSPFASEA
QNARFGAADRDDAPAVRLANPLDVAFPFLRRSLLPGLVDIARRNLSRGSTDLAIFETGTV
FLPRAGVAYGSPEMPPGAARPDADALRALDAGIPPQPRHVGVLILGDAVPKQPGTPAQRA
GLVDALDAVRQLAHAVGVEIRFEQGAHIALHPGRTAAVEAVTADGPVIVGFAGELLPALA
AELDLPERVALAEVDLDRLVELAGGAVEVRTLTSMPVATQDLSLVVPLDVPAGELLRTVV
EGAGELLETARLVDDYRGPGVADGTRSLTLALRFRAPDRTLTAAEASAARDGSVRLAAER
FGAALRE
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
gtgaggatcccgatcagctggctcggcgagcacgtcgagctccccgcgggggtcaccccc
gaggacgtccacgcgtcgctcgtgaaggtgggtctggaagaagaggacgtgcacgcgttc
tcgatctccggccccgtcgtcgtcgggcaggtgctcgaggcgagccccgagccccagacc
aacggcaagaccatcaactggtgctccgtccgcgtcgcgcccgagggcgccacggccgcc
gacggcggcgaggacgtgcgcggcatcgtctgcggcgcgcacaacttcgtcgtcggcgac
aaggtcgtggtgagcctgcccggtgcggtgctgcccggcccgttccccatcagcgcgcgg
aagacctacggccacgtgtccgacggcatgatcgcgtcgtcgcgggagctgggtctcggg
gaggagcacgacgggatcctcgtcctctccacgctcgggctcgaccccgaggtcggcacg
gacgcgctcgcgctcctgcacctcgacgaccaggcggtcgaggtcaacgtcacgcccgac
cgcggctacgcgttctcgatccgcggcatcgcccgggagtacgcgcacgccacgggcgcc
gcgttcaccgaccccgccgacgcgctcgcgctgctcgcggccgacgcaccggtccagggg
gtcgaggtgcgcgtcgacgacgccgccccgatccgcggccgcgtcggcgccgacgtgttc
gtcacgcgcgtggtctccggcctcgacctctcccggcccaccccgccgtggatggtctcg
cggctcacgctcgcgggcgtccggtcgatctccctggccgtcgacatcacgaactacgtc
atgctcgagctcggccagccgctgcacgcctacgacctcgatcggctgcagggcggcatc
gtcgtccgccgcgccgctgagggcgagacgctcgtcacgctcgacggacgcgagcgcgcg
ctgcacgtcgaggacctcgtcatcgccgacggctcgggaccggtggggctcgcgggcgtc
atgggcggcgcggccaccgagatcggcgcgggcacgagccgcgtgctgatcgaggcggcg
ggcttcgacccggtctccatcgcgcgcaccgctcgccggcacaagctgccgagcgaggcg
tccaagcgcttcgagcggggcgtggatccccgcatcgcccccgccgccgccgcacgcgcg
gtgcagctcctcgaggagctggccggcggccacgcggagggcctcggctcgatcctcgac
acgaccgccccgcgcgaggccgtcgagctgtcgctggcgtacccggcgtcgctcgtcggc
gtcgactacaccgcggacgaggtgcgccacgcgctcgtcgacgttggctgcgcgctcgag
gagcgcgacggtgtgctcgtcgtcacgccgccgacgtggcgtccggacctgcgccaccgc
gccgacctcgtggaggaggtcgcgcgcatcgtcggctacgaccggatccccgccgtgctg
cccgtcgcaccccccggccgcgggctcaccgccgcgcagcgcctccgtcgtcaggcctcg
atcgcgcttgccgcgggcgggctcaccgaggtgatgggctcgccgttcgcgtccgaggcg
cagaacgcgcgcttcggcgcggccgatcgcgacgacgcccctgcggtgcgcctcgcgaac
ccgctcgacgtcgcgttcccgttcctccgccgctcgctgctgccggggctcgtcgacatc
gcgcggcggaacctctcgcgcggatccaccgacctcgcgatcttcgagaccggcaccgtc
ttcctgccccgcgccggcgtcgcctacggctctcccgagatgccgccgggtgccgcgcgc
cccgacgcggacgcgctgcgggcgctcgacgcgggcatcccgccgcagccgcgccacgtc
ggcgtgctgatcctcggcgacgccgtcccgaagcagccgggcacccccgcgcagcgcgcg
ggcctcgtcgacgcgctcgacgcggtgcggcagctcgcgcacgcggtgggcgtggagatc
cgcttcgagcagggcgcccacatcgccctgcacccgggtcgcacggccgcggtcgaggcc
gtgaccgccgacggccccgtcatcgtgggattcgcgggcgagctcctgcccgcgctcgcc
gccgagctcgacctgcccgagcgcgtggcgctggccgaggtcgacctcgaccggctcgtc
gagctcgcgggcggcgccgtcgaggtgcgcacgctcacctcgatgcccgtcgccacgcag
gacctcagcctcgtggtgccgctcgacgtcccggccggggagctgctccgcacggtggtc
gagggcgcgggcgagctcctcgagaccgcccggctcgtcgacgactaccgcggccccgga
gtcgcggacggcacccgctcgctcacgctcgcgctccgcttccgcgcgcccgaccgcacg
ctgaccgcggcggaggcgagcgcggcccgcgacggatccgtgcggctcgccgccgagcgc
ttcggcgcggcgctgcgcgagtag
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